Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2620 ATCCGCATAGTGATTAGAGTGGGTAGTTATTTGAACTTAGTCTCCACTTTCCTCCTTGCTTGCTTTGGTGTAGTTCATCTTGCGCATGGCTCTAATAGTGATACTACCTGTCCGGATTTCTTGTGCGGAAATCAAGAAATTCGATTCCCTTTTAGAATCAAAGGCCGTCAGTCACAAAGCTGTGGCTATCCGGGCTTTGATCTGGTTTGCTCAGGTACTAGTGATGATGAGAAACTGTTTCTTGAGCTCCCTGAATCAGTGACCTTCAATGTCAAACACATCGACTATACAAAACAAACAATTGAATTAACCCCTCCATCTACCTGCCTTCCAAAGCAGCTCCATAACCTCAGTAATATCTCTGTCTTAGTTTTCCCTTTCCAACGCATGCTAGTTGAGGAGGGTGATGACTATCACTTCTTCAACTGTTCACCAGTGGCAATGGATACATATATAAACAATAACATCATGATTCCATGCCTAAGCAGCTCAACCAGTCAAGTATATGCCATTTCATCTTGGAATTCTATCCATGACCTGACAACCCTGTTTCCTTGCACCAAAATGTTCAATATTTCATCCCTCCCAGATGCACTTGTTCCAGCTCTGAAAGATACTCTTGTTTTGTTTTGGTCTGAACCAAGCTGTCAACAATGTGAATCGAAGGGGAAAAGGTGCAGCTGGAACAACAGCACCAAGAATCAACTTGATTGTCTTGTTAATGTCATCCACAAGGATTCATCAACAGCTCTAGTAACCACAATAGGATCAGTACTTGGATCGTTTTTGCTTGTCCTACTGACCGGAGCGATTTATTACATCTATGACTCTTGCATAATGCAAAAGGAAAAACAAGCAATTATTGAAAAATTTCTTGAAGATTACAGGGCTCAAAAACCAACCAGATATTCTTATACCGAAATCAAGAGAATCACCAACAACTTTGGGTACAAGTTAGGAGAGGGCGCCTATGGAACTGTCTTCAAAGGAAGCATCTCAAAAGAATTTCCTATTGCAGTGAAAATGCTGAATAATTCCCAGGGGAAAGGGGAGGAGTTTGTCAATGAAGCTGGTATAATTGGTAGAATCCACCATGTCAATATTGTCAGGTTGGTTGGTTTCTGTGCTGATGGGTTCAGAAGAGCTCTTGTCTATGAATTCTTGCCGAATTCTTCACTGCAGAAGTTCATAAATTTGCCCGACAACAAGCAAAACTTTTTGGGCTGGAAGAAGTTGCAAGAGATTGCTCTAGGTGTAGCTAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAACGCATTCTCCATTTTGATATCAAACCTCAAAATGTGTTGCTAGATCACAACGTTACTCCAAAAATTTGTGATTTCGGTCTAGCTAAATTATGCTCCAAGGATCAAAGTGTAGTGTCAATGACAGCAGCTAGAGGAACTTTGGGGTACATTGCGCCCGAAGTTTTCTCAAGGAACTTTGGAAATGTATCTTACAAGTCTGATGTTTACAGTTATGGAATGATGCTGCTAGAAACAATTGGAGGGAAGAAGATCACAGAGGATATAGAAGAAAACAGTAGCCATGTTTACTATCCAGAATGGATGCATAGTATTTTAGAAGAGACTGATGAAATCAGAATTCATATTGAAGATGAAGAAGATGCTAAAATTGCTAAGAAACTAGCAACAGTGGGACTTTGGTGCATCCAATGGCATGCAGTGGATCGACCATCAATGCAGACAGTGCTTCAAATGTTGGAGGGAGACCAAGACACAATACCAAATCCTCCTAATCCTTTTGCTTCCACAGGGCCTTCAAGAAAATATGCTAAAATTAGTGTGCCTGCAAGACAAATTACCCAAGATTTAGAAGTGATCCAAGAGTTAGATTAA 1887 0.4038 IRIVIRVGSYLNLVSTFLLACFGVVHLAHGSNSDTTCPDFLCGNQEIRFPFRIKGRQSQSCGYPGFDLVCSGTSDDEKLFLELPESVTFNVKHIDYTKQTIELTPPSTCLPKQLHNLSNISVLVFPFQRMLVEEGDDYHFFNCSPVAMDTYINNNIMIPCLSSSTSQVYAISSWNSIHDLTTLFPCTKMFNISSLPDALVPALKDTLVLFWSEPSCQQCESKGKRCSWNNSTKNQLDCLVNVIHKDSSTALVTTIGSVLGSFLLVLLTGAIYYIYDSCIMQKEKQAIIEKFLEDYRAQKPTRYSYTEIKRITNNFGYKLGEGAYGTVFKGSISKEFPIAVKMLNNSQGKGEEFVNEAGIIGRIHHVNIVRLVGFCADGFRRALVYEFLPNSSLQKFINLPDNKQNFLGWKKLQEIALGVAKGIEYLHQGCDQRILHFDIKPQNVLLDHNVTPKICDFGLAKLCSKDQSVVSMTAARGTLGYIAPEVFSRNFGNVSYKSDVYSYGMMLLETIGGKKITEDIEENSSHVYYPEWMHSILEETDEIRIHIEDEEDAKIAKKLATVGLWCIQWHAVDRPSMQTVLQMLEGDQDTIPNPPNPFASTGPSRKYAKISVPARQITQDLEVIQELD* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2620 628 ProSiteProfiles Protein kinase domain profile. 313 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2620 628 PANTHER RUST RESISTANCE KINASE LR10-RELATED 37 627 IPR045874 GO:0004672
Ahy17g2620 628 Gene3D Phosphorylase Kinase; domain 1 286 387 - -
Ahy17g2620 628 Pfam Protein kinase domain 317 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2620 628 SUPERFAMILY Protein kinase-like (PK-like) 296 585 IPR011009 -
Ahy17g2620 628 SMART serkin_6 313 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2620 628 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Ahy17g2620 628 PANTHER RECEPTOR-LIKE KINASE 37 627 - -
Ahy17g2620 628 Pfam Wall-associated receptor kinase galacturonan-binding 37 103 IPR025287 GO:0030247
Ahy17g2620 628 Gene3D Transferase(Phosphotransferase) domain 1 388 593 - -
Ahy17g2620 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2620 Ahy-Chr17 122734996 122737414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2620 38 623 Receptor kinase-like Gene Family AT1G66910 35.479 6.06e-111 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy17g2620 Pkinase 2.50E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2620 - - mtr:MTR_1g031540 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2620 17 122734996 122737414 Ahy17g2620 17 122734996 122737414 ECH