Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2613 ATGTTGTCCCTTTGTTCATTTTTGGTACCCCTTCTACTGCTGCTGGGGATCTCCTTAAACGTTTTCAATTATAGACCCCGGTGGGATAGCCTGGTGGCAATTGATGCAGACAAAAGAATGTGTTCATCTGGGTTGTGTGGGAGGCATGACATAAGGTACCAGTTCAGGCTGAATAATAGTAGTCCAAGCCACTGTGGTGAGCACAGGTACACCCTCTCTTGCGAGAATGATAACCAACTCTTTCTCTATCTCAAATCAATCAAGTTCCAAGTGCAGTCAATTAACTATAACAACTACACAATTCGACTTGTTGACGTCAATGTTCCCCTGCATACCCATAATCACTCTTCTCTCCCTAGTTATTCTTTGACCTCCTCCAACTTCACCAGAGATGATCCATATCAATATTGGTTCTATACACAGCATTTTAAAGATGTTATTAGATTGACAAAGCAGATGGTATATTTGATGAGGTGCCCACCATATGGAGTAGAATCTTCTACTGCTGTTGCAACTTGCACGAATGGATCCTATGCAATTGGGAGTACATTCTATGTCAGTGATCTTGACAAGCGTCTCCAGGATTTGGCGTTCAGAGACTCGTGTCATATAGATTGGATGTATTTGACTTCATGGCCTGCTGAAATCAAGCAGATCAACATTTCATGCACAGACATCCATCATATGCTGCTCTACGGGTTTGAACTTTCCTGGATGAAAGGATATTGCTATAATGACACAGACTATGCCATGCTCGGTGATCACAACAACATCGTTTGTTATAACAATTATTACGAAAGGTTATCTCCATTTCAAAATTATGTACTTTCATGGATTGTTCTTTGTCTAACGGATGGAACGATTTTCTTTGTTCTTGGCAAATTTGGACTTGGAGCTCTATTCATCGTTATTTTCTGCATATGTAAATGGAGACGAAGACATTTATCCATATACGACAGTATTGAAGATTTTCTGCGAAGTGACAATAACATCATGCCAATTAGATACTCCTATAAAGAAATCAAGAACATAACTGGAAAGTTCAAGACTAAACTAGGAAATGGAGGCTATGGCTCTGTCTTCCAAGGAAAACTTCGAAGCGGTCGTCTTGTAGCTGTTAAGGTATTGAATAAGGCCAAATCCAATGGCCAGGAGTTCATCAATGAAGTTGCTACTATTGGAAGAATTCACCATGTTAATGTGGTGCAACTCATTGGTTTCTGTGTGGAGGGATCAAAGCGTTGTTTGGTGTATGAGTTAATGCAAAATGGCTCTTTAGAGAAATACATATTTTCACCTCAAGAGGGTGCTTCAAATTCCTTAAATTGTGAAAAACTGTACAACATTTCTCTTGGAGTGGCCCGTGGTATTGAGTATCTGCATAATGGTTGCCACATTAAAATTCTGCACTTTGACATTAAGCCTCATAACATTCTTTTGGATGAGAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTTTATCCCACTGATAAAAGCATTGTGTCTCTGACCGCAGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTATAGAAACGTCGGCACAATCTCATACAAAGCAGATGTTTATAGCTTTGGGATGTTGTTGATGGAAATGGCTAGTAGAAGGAAGAATTTGAATGCTTTGACTGAAAATTCCAGCCAAATATATTTTCCTTTCTGGGTTTATGATCAATTGCTTGATGGAAGGGAAATAACAATAGAGAATGACACAGATGAAGAGATGAAGTTGGCAAGAAAAATGATGATTGTGGCATTGTGGTGTATACAGACAAAGCCTAATGATCGACCTTCAATGAAGAAAGTTGTGGAGATCCTAGAACAAGATGAGGACTTATTAGAAATGCCTCCTAAGCCTTACTTCTATCCACTTGATGAACCTGCAGACGAAGTTGGAGAAGAAAACAGTTCAAGGCTATCCTCTGTTATCTCATCAGTTACTGGTTCCAAAGAATAG 1992 0.3966 MLSLCSFLVPLLLLLGISLNVFNYRPRWDSLVAIDADKRMCSSGLCGRHDIRYQFRLNNSSPSHCGEHRYTLSCENDNQLFLYLKSIKFQVQSINYNNYTIRLVDVNVPLHTHNHSSLPSYSLTSSNFTRDDPYQYWFYTQHFKDVIRLTKQMVYLMRCPPYGVESSTAVATCTNGSYAIGSTFYVSDLDKRLQDLAFRDSCHIDWMYLTSWPAEIKQINISCTDIHHMLLYGFELSWMKGYCYNDTDYAMLGDHNNIVCYNNYYERLSPFQNYVLSWIVLCLTDGTIFFVLGKFGLGALFIVIFCICKWRRRHLSIYDSIEDFLRSDNNIMPIRYSYKEIKNITGKFKTKLGNGGYGSVFQGKLRSGRLVAVKVLNKAKSNGQEFINEVATIGRIHHVNVVQLIGFCVEGSKRCLVYELMQNGSLEKYIFSPQEGASNSLNCEKLYNISLGVARGIEYLHNGCHIKILHFDIKPHNILLDENFNPKVSDFGLARLYPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMASRRKNLNALTENSSQIYFPFWVYDQLLDGREITIENDTDEEMKLARKMMIVALWCIQTKPNDRPSMKKVVEILEQDEDLLEMPPKPYFYPLDEPADEVGEENSSRLSSVISSVTGSKE* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2613 663 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2613 663 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Ahy17g2613 663 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 246 IPR045874 GO:0004672
Ahy17g2613 663 PANTHER RUST RESISTANCE KINASE LR10-RELATED 288 642 IPR045874 GO:0004672
Ahy17g2613 663 ProSiteProfiles Protein kinase domain profile. 346 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2613 663 MobiDBLite consensus disorder prediction 646 663 - -
Ahy17g2613 663 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Ahy17g2613 663 SMART serkin_6 346 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2613 663 Gene3D Phosphorylase Kinase; domain 1 325 420 - -
Ahy17g2613 663 Gene3D Transferase(Phosphotransferase) domain 1 421 631 - -
Ahy17g2613 663 MobiDBLite consensus disorder prediction 636 663 - -
Ahy17g2613 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Ahy17g2613 663 SUPERFAMILY Protein kinase-like (PK-like) 327 619 IPR011009 -
Ahy17g2613 663 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 288 642 - -
Ahy17g2613 663 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 38 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2613 Ahy-Chr17 122648865 122652250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2613 31 659 Receptor kinase-like Gene Family AT5G38260 35.897 4.40e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy17g2613 Pkinase 7.20E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2613 - - aip:107607706 1025.77