Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2610 ATGGAGATGGAATTCACAAAAGGAAATAAGGGTTGCGACACGATGGAAGGAAGCCAAAGGGAGGAGGGGTGTAGGCCTGATGAGGAATTGGATGATGCATGCGGCGGTGACAGCATGAATGGAGTATCGGATGAGTATCCATCCGATTATGCTTATGTATTCGGGTTGTCAGAACAAGATATAATAAGAAAAGTCTTTCGAAGTGAGGAAAGAGCATATGATTTTTACAGTAAATTTGGCAGATGTCATGGATTTGGCGTGCGCAAGGGTGATTATGGAAAGGATGAAGAAGGAAATTTGATAAGGAGAAGGTTTTTTTGTAATAGGGCCGGACTGAGAGATGAGAAACACTTGAACAGGTTGGATAGAAAAAGGGGACACCGTCCTGAAACAAGGACTAATTGCTTGGCGAAGCTGTCGATTTATCTGGATAGGGAAAACTCAACATGGAAGGTTCGCAAAGTAATCTTGGATCACAATCATGAACTGACACCTCGAAGGATGGTGCACATGATTCCGAAATTCCGTCGTATATCGGATGCTGCAAAGGCAAACATAGATGGCATGCGTGGGTATGGTGTTTCGACATCAAAGATTTTGGGTTACATGGCTGGGGTTGCCGGAGGGTACTCTTTGTTGGGCTTTACAAAAAAGGATGCGTACAACTACATTGATCACATGAGGCGGGCCAAGGTCGTTAATGGTGACTCGAATGCCGCTATTGTATATCTAGAGGGAAAGGCAGCGGCGGATCCAATGTCAATGGCTAGGTATAATGTTACAAAGGATGGAATGTTGGCGAACATGTTCTGGGCTGATGGACCTTGCAGAGTAGACTATCAGTATTTTGGGGATGTGGTCGCCTTTGACTCGACATACAAGAAGAATAAGTACCAGCGCCCGTTAGTGATATTCTCTGGGTCAAACAATCATAAGCAAACCACGATATTCGGATTTGGATTGGTGCTAGATGAAACAATAGAAAGTTATACGTGGATGTTGGAGAATTTGTTGGAGGTGATGTGTAATAAGCAGCCTTCTGTTGTGGTAACTGATGGCGATGATGCGATGATTGCGGCAGTCAAAAAAGTGTTTCCAGAAGCTACTCATCGGTTGTGTGCATGGCACTTACAGAAGAATGTAACCTCAAATGGAGGCGAGCAGATGTTTCGTGAGATATTCTGTAAATGGCTTTATGCTGACATGGAGGTAGATGACTTCGAGCTTGAATGGGAAGAAGCTTCTGAGAAATTTGGTCTACACAAAAAATGTTGGGCAAACCAGATGTACGAAAAAAGGCACATGTGGTGTAATGCGTACCTTCGTGGCAAGTTTTGTGCTGGATATCGCACAACGTCTAGGTGTGAGGGAATAAATTCTCACATAAAGGGATTTTTGAACTCAAGACATAGTATTTTGGAATTGGTGCAAAATTTGGAGTTGGTAGTCCGAGAATACCGCAACAACGAGCTAGTTGCGCAATTCAATTCAATATATAGCACCCCTGTTCTAACAACGTGTCTGGATCCTATTGAGAGGTGCGCTGCAGATGTTTACACGAGAGCTATTTTTGTACTAGTTAAGAAAGAGATTGACGGTGTTGGAGCGGTTAATTTTGTGAGTAAAAGGAGGGTCTCCACAACAATGGTATAG 1653 0.4338 MEMEFTKGNKGCDTMEGSQREEGCRPDEELDDACGGDSMNGVSDEYPSDYAYVFGLSEQDIIRKVFRSEERAYDFYSKFGRCHGFGVRKGDYGKDEEGNLIRRRFFCNRAGLRDEKHLNRLDRKRGHRPETRTNCLAKLSIYLDRENSTWKVRKVILDHNHELTPRRMVHMIPKFRRISDAAKANIDGMRGYGVSTSKILGYMAGVAGGYSLLGFTKKDAYNYIDHMRRAKVVNGDSNAAIVYLEGKAAADPMSMARYNVTKDGMLANMFWADGPCRVDYQYFGDVVAFDSTYKKNKYQRPLVIFSGSNNHKQTTIFGFGLVLDETIESYTWMLENLLEVMCNKQPSVVVTDGDDAMIAAVKKVFPEATHRLCAWHLQKNVTSNGGEQMFREIFCKWLYADMEVDDFELEWEEASEKFGLHKKCWANQMYEKRHMWCNAYLRGKFCAGYRTTSRCEGINSHIKGFLNSRHSILELVQNLELVVREYRNNELVAQFNSIYSTPVLTTCLDPIERCAADVYTRAIFVLVKKEIDGVGAVNFVSKRRVSTTMV* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2610 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 536 IPR031052 GO:0006355
Ahy17g2610 550 MobiDBLite consensus disorder prediction 1 30 - -
Ahy17g2610 550 PANTHER OS02G0262500 PROTEIN 59 536 - -
Ahy17g2610 550 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy17g2610 550 Pfam MULE transposase domain 286 380 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2610 Ahy-Chr17 122601632 122606014 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g2610 MULE 3.80E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2610 - - ahf:112758792 729.939