Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2603 ATGAAGTACCATTCTCACCCAAATCCTCCCTCACCGCCACTCTTATCCCCAACCACCACCACCACTAACGTTATCACCATCAAAACCATCCCTTTCTCCTTTTATGCTGTCCTATACACCAGCGAACTCAACGATATTTTTCGCCGTTCATCTTCATGCCGCGTCGGTGCCATTTGCTGCTTCGAATTCGAAGAAGATGATTATGTTCGAACCTTGCCTCTTTGCTCACAAACCTTCCATGTTGATTGTATCGATGCTTGGCTTCGCTCCCACACAAGCTGCCCTCTCTACCGCGCTGGGGTTCTCTCTGCCGCTTTGCTGTTTGCTCCCATGTTCGCCGCCAGGATCCGACCAAGTCTTGACGCCGACGAATATGGCTCGAAATCAGCAGGGGAAGTAAAAGTTGGGAACCGGTCTGAGAGTAATAGAGGTGGTGATGGCGGTGGTGGTGACGGTGGTAATGGTGGTGAAGAAGAGTTTGAGTAG 486 0.5062 MKYHSHPNPPSPPLLSPTTTTTNVITIKTIPFSFYAVLYTSELNDIFRRSSSCRVGAICCFEFEEDDYVRTLPLCSQTFHVDCIDAWLRSHTSCPLYRAGVLSAALLFAPMFAARIRPSLDADEYGSKSAGEVKVGNRSESNRGGDGGGGDGGNGGEEEFE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2603 161 MobiDBLite consensus disorder prediction 123 161 - -
Ahy17g2603 161 Pfam Ring finger domain 57 96 IPR001841 -
Ahy17g2603 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 104 IPR013083 -
Ahy17g2603 161 SUPERFAMILY RING/U-box 57 96 - -
Ahy17g2603 161 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 26 122 - -
Ahy17g2603 161 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 26 122 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2603 Ahy-Chr17 122523721 122527239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2603 26 157 C3H Transcription Factor Family AT3G18930 41.007 1.09e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2603 - K19041 ahf:112756727 207.994