Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2590 ATGTATGCAGAAACCGGCCTTCTCTTCCCACACATGCAGAACTTCTCTAATCACGACCTTCATCAACTCGACGAGTACTGCAACACCTTCAAGTCTAATGCTTCATTGAGTGATCCTGTTCAATCTTCTGTCATGTCGGAGTATGATTTGGCAGCAGAGGGTGATCTGTTCAAAGCCCCGGAACCTATTTTTGAAGAGTCATTCATGAACCTGGATCCTGTGACAGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGACTAAAATCTGCTGATATTGATGTTCTTCAAAAGGAACAGCTTCTGAGTGATGTGTTTTATGAGTGTGAAAAGGATCTCTTAGAAAAGGCAGCAATAGACTTGCCGTTCTCCGATATTCTGGAAATCAAAGTTCCTGTTCTTAACACAGAGGAGAACTCAATTGAAGAAAAGAAACAATTTCTAGACATGCCACCATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGCTACAATGAAGCCTGCTTTCCTCGATGTCCCAGGAATAGATTTCGATGAAGTTTATGGCATGAGGAGATCATTTAGTGAGGGAGATATAAAGACTTTAGGTAATGGCAATCTGAACATAGTCCAGTCTCCCCACGAGAGGCGTATGCTTATCGGCAATAGCATCAAAGAGGAACGCCAAGAGAAGCTATCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAGCCTAGAATCCGTGGAAGATTTGCGAAAACCGAAGAATATGATACCAAGAGGCAATGA 852 0.4308 MYAETGLLFPHMQNFSNHDLHQLDEYCNTFKSNASLSDPVQSSVMSEYDLAAEGDLFKAPEPIFEESFMNLDPVTAAISMISCGEDVSSQGLKSADIDVLQKEQLLSDVFYECEKDLLEKAAIDLPFSDILEIKVPVLNTEENSIEEKKQFLDMPPLPKSVSSGSLSSMDWMHGATMKPAFLDVPGIDFDEVYGMRRSFSEGDIKTLGNGNLNIVQSPHERRMLIGNSIKEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDTKRQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2590 283 PANTHER CCT MOTIF FAMILY PROTEIN 28 281 - -
Ahy17g2590 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Ahy17g2590 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 281 - -
Ahy17g2590 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2590 Ahy-Chr17 122276717 122281253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2590 228 279 C2C2-CO-like Transcription Factor Family AT3G21880 49.057 1.33e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy17g2590 CCT 1.80E-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2590 - - gmx:100814332 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2590 17 122276717 122281253 Ahy17g2590 17 122276717 122281253 ECH
Ahy17g2590 17 122276717 122281253 Ahy8g0374 8 7696250 7700783 hybridization