Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2577 ATGGGGAAGAAGAGGGGAAGCTGGTTCTCTTCGGTCAAGAAAGTTTTCAAGTCATTCCCTAAGGACTCCAACTCACCCCTTCCACACAACAAGAAGGAGAATAATGAAGACAAGTGGCAGCAGGAAGCAGCAGAAGTTGTGTCTTTTGAGCATTTTCCTGCAGAGAGTTCTCCTGATGGAACTAATGAGGGTAGCACCACATCCACTCCAGTGGCTGAGGACAGAAATCATGCCATTGCCTTTGCCGCTGCCACTGCCGTAGCTGCTGAAGCTGCTGTGGCAGCTGCTCAGGCAGCCGCTAGAGTTGTGAGAATGGCGGGTTATGGACGCCACTCCAAGGAGGAAAGGGCTGCAGTACTCATTCAATCGTACTACAGAGGATACCTTGCTCGACGTGCACTGCGTGCATTGAAGGGATTGGTGAGGCTGCAGGCACTTGTGAGGGGACACAATGTGCGGAAGCAAGCGCAGATGACAATGCGGTGCATGCAAGCATTGGTTCGAGTTCAGGCAAGAGTAAGGGCTCGTAGAATTCAGTTAAGTCATGAGAAAAAGAAGCAAGAGGAGAGACAACATGAGGCTAGAATGAAGAGGGAGAGAGCTCTTGCTTACGCCTTCAACTACCAGAAGAGCGAGACTGCACAATTGGATTGGAACTGGTTGGAGCGTTGGATGTCATCACAACACTCACAACAACACACCGATGACATGTCCCAAGAGAAAACGGTTCAGATGGACATGCTTGGGCCTCGTGATCCAATTCACGCAAATATGGGCCTGATGGCCCAAGAATACCTTGATTCAAGCCCTATCTCAAAATTGCAACACCAGAGACAGCACAGTGGAGGTGCAACTGTGCCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGTTAGGGGTCAGGGCCAACTTAAGCAACGGCCTTCACCTGGGCCCAACTGGAACACTTCTGCAAGGAGAACCCCTGCTGTTGGGTTGGGCTTTGACTCATCTAGCTCTGGTGGGCCCACTGCAACCTATCAGTTTCCAAGGTGCCCAAGCCCAAAGATAAATGGGGTGCGGCTCCAGTCTAGACGAATTTCTGGCGGGAGCCCAGATCATGTTAGTGGGGAAGATTTTGGTCTTCTCCTTGGAGCCCATGGTTGGGCATGA 1158 0.5155 MGKKRGSWFSSVKKVFKSFPKDSNSPLPHNKKENNEDKWQQEAAEVVSFEHFPAESSPDGTNEGSTTSTPVAEDRNHAIAFAAATAVAAEAAVAAAQAAARVVRMAGYGRHSKEERAAVLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLSHEKKKQEERQHEARMKRERALAYAFNYQKSETAQLDWNWLERWMSSQHSQQHTDDMSQEKTVQMDMLGPRDPIHANMGLMAQEYLDSSPISKLQHQRQHSGGATVPSYMAPTQSAKAKVRGQGQLKQRPSPGPNWNTSARRTPAVGLGFDSSSSGGPTATYQFPRCPSPKINGVRLQSRRISGGSPDHVSGEDFGLLLGAHGWA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2577 385 PANTHER IQ-DOMAIN 21 1 358 - -
Ahy17g2577 385 Gene3D - 112 161 - -
Ahy17g2577 385 Pfam Protein of unknown function (DUF4005) 269 312 IPR025064 -
Ahy17g2577 385 MobiDBLite consensus disorder prediction 26 44 - -
Ahy17g2577 385 MobiDBLite consensus disorder prediction 276 352 - -
Ahy17g2577 385 PANTHER IQ-DOMAIN 5-RELATED 1 358 - -
Ahy17g2577 385 MobiDBLite consensus disorder prediction 18 70 - -
Ahy17g2577 385 MobiDBLite consensus disorder prediction 308 342 - -
Ahy17g2577 385 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Ahy17g2577 385 SMART iq_5 136 157 IPR000048 GO:0005515
Ahy17g2577 385 SMART iq_5 113 135 IPR000048 GO:0005515
Ahy17g2577 385 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Ahy17g2577 385 MobiDBLite consensus disorder prediction 276 292 - -
Ahy17g2577 385 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Ahy17g2577 385 Pfam IQ calmodulin-binding motif 141 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2577 Ahy-Chr17 121404871 121414145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2577 1 351 IQD Protein Family AT3G49260 46.444 2.03e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2577 - - aip:107605892 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2577 17 121404871 121414145 Ahy17g2577 17 121404871 121414145 ECH
Ahy17g2577 17 121404871 121414145 Ahy8g0365 8 7473364 7475702 hybridization