Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2565 ATGGCCTTAACAAGCTCACATATACAAAGGTTCCTCTTGGGCAAGCTCCATAGCCGCTTCTCCTCCAACCACAGAAACCCCTTTGCTGCTGTTACATGCACAAGCAGGTGCTACTCTGCCATTGCCATTGATGCACCTTCATCTTTAGCTGAGGCTCCTGGTGTAAGATGGGGATCCATAGCTTTGCAGGGTTTAAGGGAAGAGATGGAGGATGATATCATTGTTCGCCCTGATGGCCTTCATGGATTCTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGCTTCTCTTCTGTTGAGTTCCTCAGGGATGAGCTCTACAAGGAGTGTCTTGAAGCCTTACAAGGTGGGTTAGTATTGGTTGAGAAAGATTTCAAAGCCACTAAAGAAGCATTAGAGCAAGCATTTGCCAAAGCTGATGCCAAGTTGTTAAAATGGCTTGAAATGAAGGGAGAGGAGGACGAATCAGGCGCAACAGCAACTGCAGTGTTCGTAGGGGATGATACGCTGCTCGTTTCGCACATTGGCGACTCATCTGTGGTTCTATCTAGAGCTGGAAAAGCAGAAATGCTTACTAGTCCTCACAGACCATATGGGAGGAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTGAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTCGGGGACTTACGATACAAAACAAAGAAGAATGAGATGCTACAAAAAGGAGTTCAAGAAGGACGATGGTCAGAAAAGTTTATCTCTCGGGTACGGCTCAACAATGATTTAGTTGTTGCATACCCTGATATTTATCAAGTAGATCTTGGCTCAGATGCTGAGTTTATAGTATTAGCGTCAGATGGCTTATGGGATTATATGAGCAGCTCAGATGCAGTTTCCTTTGTGAGGGAACAGTTACAAAAGCATGGAAACATTCAGGTAGCCTGTGAAGCACTTGCACAAGCAGCTATGGACCGTAGAACACAGGATAATGTGAGCATTATAATTGCTGATTTAGGGAAGACAGATTGGGAGAATGTGGCAGTGCAGCAACAAAATATGGTATTGGAGCTGGTTCAAGCCCTTGCTACCATTGGTATTGTGTCCATTGGAATTTGGTTTTCGTCTCAGCTTTCATTATAG 1158 0.4439 MALTSSHIQRFLLGKLHSRFSSNHRNPFAAVTCTSRCYSAIAIDAPSSLAEAPGVRWGSIALQGLREEMEDDIIVRPDGLHGFSFAAVFDGHGGFSSVEFLRDELYKECLEALQGGLVLVEKDFKATKEALEQAFAKADAKLLKWLEMKGEEDESGATATAVFVGDDTLLVSHIGDSSVVLSRAGKAEMLTSPHRPYGRNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDLRYKTKKNEMLQKGVQEGRWSEKFISRVRLNNDLVVAYPDIYQVDLGSDAEFIVLASDGLWDYMSSSDAVSFVREQLQKHGNIQVACEALAQAAMDRRTQDNVSIIIADLGKTDWENVAVQQQNMVLELVQALATIGIVSIGIWFSSQLSL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2565 385 SMART PP2C_4 46 342 IPR001932 -
Ahy17g2565 385 ProSiteProfiles PPM-type phosphatase domain profile. 56 344 IPR001932 -
Ahy17g2565 385 PANTHER PROTEIN PHOSPHATASE 2C 57 8 381 - -
Ahy17g2565 385 SUPERFAMILY PP2C-like 49 345 IPR036457 -
Ahy17g2565 385 Gene3D - 55 351 IPR036457 -
Ahy17g2565 385 CDD PP2Cc 63 344 IPR001932 -
Ahy17g2565 385 Pfam Protein phosphatase 2C 58 337 IPR001932 -
Ahy17g2565 385 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Ahy17g2565 385 PANTHER PROTEIN PHOSPHATASE 2C 8 381 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2565 Ahy-Chr17 121300981 121304176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2565 1 321 PP2C-type Phosphatase Gene Family AT4G27800 61.350 7.19e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2565 K04457 - gmx:100784071 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2565 17 121300981 121304176 Ahy17g2565 17 121300981 121304176 ECH
Ahy17g2565 17 121300981 121304176 Ahy8g0354 8 7345142 7347820 hybridization
Ahy17g2565 17 121300981 121304176 Ahy16g3598 16 153613458 153615674 PCT
Ahy17g2565 17 121300981 121304176 Ahy6g2843 6 114309453 114311669 PCT