Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2560 ATGGCAAACTTTTCAATCCCAATCCCAAGAAACGGTTTGTCCATACCCAACTACTCAACCAAACGCCCTTCAACACTTCACACGCCCCTCAAAGTTTCTTGCTCTGAGTCTGGGACGAATTCGAATGGAATCAAGGGCCTAGCTTGTGGGATTCTTGCTGCTTGCGCTGTCTCTTCTTCTGCATTCTCTGTGACTGCTGCTAACCAGAGGCTGCCGCCGCTGTCAACTGAGCCGAACCGCTGCGAGCGAGCATTTGTTGGCAACACAATTGGGCAGGCAAATGGAGTGTATGACAAACCGTTAGATCTCCGCCTCTGCGACTACACGAATGAAAAATCCAACCTCAAAGGGAAGTCCCTGTCAGCAGCACTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACAGAAGTTGTAATGTCAAAGGCTTATGCTGTTGGTGCCAGCTTCAAAGGTGTGGACTTCTCAAATGCAGTGTTGGACCGTGTTAACTTTGGGAATGCGAATCTTGAAGGAGCTGTGTTTAGGAACACAGTGTTGTCAGGGTCTACTTTTGATGATGCTAAGCTGGAAGATGCAGTGTTTGAGGACACTATCATAGGTTACATTGATCTTCAGAAGCTATGCACAAATAAAACCATAAGTGATGAAGGCAGAGCTGAGCTTGGTTGTCGATCATGA 681 0.4714 MANFSIPIPRNGLSIPNYSTKRPSTLHTPLKVSCSESGTNSNGIKGLACGILAACAVSSSAFSVTAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRLCDYTNEKSNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNFGNANLEGAVFRNTVLSGSTFDDAKLEDAVFEDTIIGYIDLQKLCTNKTISDEGRAELGCRS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2560 226 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 225 IPR044195 -
Ahy17g2560 226 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 225 - -
Ahy17g2560 226 Gene3D - 101 225 - -
Ahy17g2560 226 Pfam Pentapeptide repeats (8 copies) 160 197 IPR001646 -
Ahy17g2560 226 Pfam Pentapeptide repeats (8 copies) 120 157 IPR001646 -
Ahy17g2560 226 SUPERFAMILY Pentapeptide repeat-like 104 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2560 Ahy-Chr17 121216172 121217497 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2560 17 121216172 121217497 Ahy17g2560 17 121216172 121217497 ECH
Ahy17g2560 17 121216172 121217497 Ahy10g1411 10 78124615 78127279 hybridization
Ahy17g2560 17 121216172 121217497 Ahy8g0350 8 7268968 7270223 hybridization