Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2546 ATGGCTGCTTTTACATCGGTTGCTCTACAACCTTTGGTACCTTCTTTTGAAGGAACCCGTGATCATAGTTCATGGTTGGTGAGTGTGAAATCACACAGATACACAACAGGTCAGAGATTAAATCAGATGAACATTGCAAGGGGGTTAACAATTCATTGTGCAGCTACAAAACCAGCAAAATCACCAGCTGAAGAAGACTGGAAGGTTAAGAGAGAAGTTCTGTTGGAAAAGAAGGTAAGAAGTGTTGATGTAAAGGAAGCTCTGCGCCTTCAGAAAGAGAATAAGTTTGTGATTCTTGATGTAAGGCCTGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCCATTAATGTGCAAATATATAGGCTTATAAAAGAGTGGACTGCATGGGACATTGCTAGGCGTGCTGCATTTGCATTTTTTGGTATTTTTTCTGGTACAGAAGAGAACCCTGAGTTCATAAAGACCGTTGAATCAAAATTAGATAAAAATGCAAAGATAATAGTAGCTTGTTCATCAGGGGGTACAATGAAGCCAACACAAAATCTGCCAGAAGGTCAACAATCAAGGTCTCTGATAGCAGCTTACGTGCTGGTCCTTAATGGTTTTACCAATGTGTTCCATCTAGAAGGAGGCCTTTACGCATGGTTTAAAGAGGGTCTTCCTACAGTTTCAGATGAGTGA 684 0.4094 MAAFTSVALQPLVPSFEGTRDHSSWLVSVKSHRYTTGQRLNQMNIARGLTIHCAATKPAKSPAEEDWKVKREVLLEKKVRSVDVKEALRLQKENKFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIKTVESKLDKNAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYVLVLNGFTNVFHLEGGLYAWFKEGLPTVSDE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2546 227 Gene3D - 66 223 IPR036873 -
Ahy17g2546 227 Pfam Rhodanese-like domain 84 217 IPR001763 -
Ahy17g2546 227 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 26 226 - -
Ahy17g2546 227 SMART rhod_4 82 222 IPR001763 -
Ahy17g2546 227 CDD RHOD 86 216 - -
Ahy17g2546 227 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 224 IPR036873 -
Ahy17g2546 227 ProSiteProfiles Rhodanese domain profile. 92 225 IPR001763 -
Ahy17g2546 227 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 26 226 IPR043186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2546 Ahy-Chr17 120799653 120802488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2546 1 227 Sulfurtransferasese or Rhodanese AT4G27700 67.100 1.66e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2546 - - gmx:100788147 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2546 17 120799653 120802488 Ahy17g2546 17 120799653 120802488 ECH
Ahy17g2546 17 120799653 120802488 Ahy8g0334 8 6826080 6828779 hybridization