Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2543 ATGGGGGGTTCATCAGATACGAGGTTCCTGCAAGACTTGCTATTATACGCGGCCAGCGCTGCTATGAGTTGCCTGGTTCTCTTCGTTGGGTTACGACAACTTGACCCAACCCGGGAGGCTTCCAAAAAGGTCCTCGAACACAAGAAGGAGATTGCCAAGCGTCTTGGTCGACCCCTTGTCCAGACCAACCCTTACGAGGATGTTATAGCAGGTGACGTTATAAATCCTGATCACATCGATGTGGAGTTTGACTCTATTGGGGGATTGGAAACAATCAAGCAAGCTCTGTTTGAGCTTGTTATACTGCCTCTGAAAAGACCGGACTTGTTTTCGTATGGTAAGCTTCTTGGACCTCAAAAGGGCGTCCTGTTGTATGGACCTCCAGGAACTGGGAAAACCATGCTTGCGAAAGCAATTGCTAAGGAGTCAGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCCCAAAAGCTTGTGACTGCTGTATTTACCCTTGCTAATAAGCTCCAGCCTGCCATCATATTCATTGATGAGGTTGACAGTTTTTTGGGTCAACGTCGTACATCGGATCATGAGGCTTTATTAAACATGAAAACTGAGTTTATGGCTCTATGGGATGGATTTACCACAGATCATAATGCTCGAGTTATGGTCCTTGCAGCTACCAATCGTCCTTCTGAACTTGATGAAGCAATACTTCGACGCCTTCCTCAAGCTTTTGAAATTGGAATTCCAGACCAGAGGGAGAGAGCTGCGATATTGAAGGTTATCTTAAGGGGAGAGAGGGTTGACGAAGGCATAGACTTTGATTATATAGCTAGCTTATGTGAGGGTTATACTGGGTCAGATCTGTTTGACCTTTGCAAGAAGGCTGCCTATCTTCCTATTCGAGAACTACTGGATGAAGAGAAGAAGGGAAAACGTTCTTCCGTGCCTAGGCCTTTGTCGCAGTTGGATTTGGAGAAGGTCCTTGACACTTCCCAGAAGACGAAGGCTGCTGCAAGTGCATATAGTGGGTTGTCATCATCAAGGTGGACACCAAGTGAGTCAGAATAA 1080 0.4583 MGGSSDTRFLQDLLLYAASAAMSCLVLFVGLRQLDPTREASKKVLEHKKEIAKRLGRPLVQTNPYEDVIAGDVINPDHIDVEFDSIGGLETIKQALFELVILPLKRPDLFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVTAVFTLANKLQPAIIFIDEVDSFLGQRRTSDHEALLNMKTEFMALWDGFTTDHNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERAAILKVILRGERVDEGIDFDYIASLCEGYTGSDLFDLCKKAAYLPIRELLDEEKKGKRSSVPRPLSQLDLEKVLDTSQKTKAAASAYSGLSSSRWTPSESE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2543 359 CDD AAA 116 251 - -
Ahy17g2543 359 Pfam AAA+ lid domain 275 310 IPR041569 -
Ahy17g2543 359 Gene3D - 253 333 - -
Ahy17g2543 359 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Ahy17g2543 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
Ahy17g2543 359 Gene3D - 80 338 IPR027417 -
Ahy17g2543 359 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 349 - -
Ahy17g2543 359 SMART AAA_5 118 254 IPR003593 -
Ahy17g2543 359 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 349 - -
Ahy17g2543 359 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2543 Ahy-Chr17 120721848 120726065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2543 81 355 Calmodulin-binding Proteins AT3G56690 31.633 1.30e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2543 K22530 - gmx:100796908 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2543 17 120721848 120726065 Ahy8g0331 8 6770053 6774933 hybridization