Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2531 ATGAATAGCACATCCCCTGTTTCGGAATGCTTCGTGAAGCCACACCACAGCACGCAAGACTCAACACAACTGTGCCACCTAACACCATGGGATCTTGCCATGCTCTCCGTCCATTACATCCAAAAGGGACTTCTCTTCAAGAAGCCACAAAACCAACCTCAAAATTTCACCCAAAATCTATTGCACGATCTCAAACACTCACTCTCTCTTACCCTTATCCATTTCTATCCCTTGGCTGGTCGCCTTGTTACTCACCAAACCCAAGACCCTCCCTCTTATTCTGTCTCCGTTGACTGCGTCAACTCTCCCGGAGCAAAATTCATCCACGCAACGGTGGATCTCACCGTATCTGATATCCTCTCCCCCGTTGACGTCCCTCCGATTGTTCAGTCGTTCTTTGATCATGACAGAGCCGTCAGTCATGACGGCCACCACGTGTCCCTCTTAACCATCAAAGTCACTGAACTAATCGACGGCGTTTTTATTGGCTGCTCCATGAACCATTCCCTCGCTGATGGCACTTCTTACTGGAACTTCTTCAACGCTTGGTCTAAGATCTTTCAATCTCATTCTCAATCTAAATTCAAAGGGGAACAAGACGTTGATGTTGCCAACATTTCCCACAAGCCCATTCACAAGCGCTGGTTTCCACAGGGTTGTGGCCCAATAATCAATCTCCCATTCAAACACCATGACGAGTTTGTCTGTAGATTCGAAGCACCAAAACTCAGAGAGAGGATCTTCCACTTCAGTGCAGAATCCATTGCCAAGCTGAAAGCAAAGGCAAACCAGGAATCCAACACCACCAAGATCTCTTCATTCCAATCATTGTCAGCACTTGTTTGGAGATGCATCACTCGTGCTCGCAGATTACCGCATGATAGAAAGACGAGTTGCAAGCTGGCAATGAACAATCGAAGCAGAATGGAACCTCCTCTGCCTCCGGAATACTTTGGGAACGTACTTCATGCGGTGAGTGCAGCAATGACAGCAGGGGAATTGCTTGAACATGATCTGGGTTGGGCAGCGTGGAAGATCCACCTGGCTGTTGTGAACCATAATAATGGAGTGACGCTTGAGTTTCTCAAAGAGTGGTTAAAGTCTCCAGTGATCTATCAACATGCTCGGTTCTTTGAACCGGCTAGTGTGATGATGGGTAGTTCACCGAGATTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCGGTGGCGGTTCTGAGTGGATATGCTAATAAATTTGATGGGAAAGTAACGTCATACCCTGGCCGCGAAGGAGGTGGAAGCGTTGACTTGGAAATGTGTCTTTTTCCAGATTCAATGTGTGCGTTGGAATCTGACCAAGAGTTCATGAATGCGGTTTCTGTGTCTAATTAA 1377 0.4691 MNSTSPVSECFVKPHHSTQDSTQLCHLTPWDLAMLSVHYIQKGLLFKKPQNQPQNFTQNLLHDLKHSLSLTLIHFYPLAGRLVTHQTQDPPSYSVSVDCVNSPGAKFIHATVDLTVSDILSPVDVPPIVQSFFDHDRAVSHDGHHVSLLTIKVTELIDGVFIGCSMNHSLADGTSYWNFFNAWSKIFQSHSQSKFKGEQDVDVANISHKPIHKRWFPQGCGPIINLPFKHHDEFVCRFEAPKLRERIFHFSAESIAKLKAKANQESNTTKISSFQSLSALVWRCITRARRLPHDRKTSCKLAMNNRSRMEPPLPPEYFGNVLHAVSAAMTAGELLEHDLGWAAWKIHLAVVNHNNGVTLEFLKEWLKSPVIYQHARFFEPASVMMGSSPRFNMYGNEFGMGKAVAVLSGYANKFDGKVTSYPGREGGGSVDLEMCLFPDSMCALESDQEFMNAVSVSN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2531 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 454 - -
Ahy17g2531 458 Pfam Transferase family 11 451 - -
Ahy17g2531 458 Gene3D - 7 223 IPR023213 -
Ahy17g2531 458 Gene3D - 236 446 IPR023213 -
Ahy17g2531 458 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2531 Ahy-Chr17 120385253 120386957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2531 64 445 Monolignol Biosynthesis Gene Families AT5G48930 26.420 6.11e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2531 - - gmx:100787228 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2531 17 120385253 120386957 Ahy17g2531 17 120385253 120386957 ECH
Ahy17g2531 17 120385253 120386957 Ahy8g0318 8 6569493 6571192 hybridization