Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2474 ATGCATGTCTTGGGATGCTTCCTCCTATTGCTGTCTCTCTTCATCCTCTCACCTTCTGATGCTTTTTCCAGCGATGAAGCTTCTTTCATTGCACGTCGCCAATTGTTAACCCTTGAGGAGAACGCTGATTTACCCGACGACTGGGTGGATAATTACCAAATTAACCTGACCTTTGATAATCCTAGGCTCAAGAGTGCCTACATTGCCCTTGAAGCATGGAAGCATGCTATCTATTCTGACCCATCAAACTTCACATCTAATTGGGTGGGCCCTAATGTTTGCTCTTACAATGGAGTCTATTGTGCTCCAGCACTTGATGACCCTTCGATTCAAGTTGTGGCTGGCATTGATCTTAACCATGCAGATATTGCAGGCTACATCCCTTCAGAGATTGGGTTGTTAACTGATCTTGCACTTTTGCACATAAACTCTAACAGGTTTTGTGGCATTCTCCCAAAAAGCTTCTCCAAGTTAAAGCTCTTGTATGAGATTGATATCAGCAACAACCGTTTTGTGGGTCCGTTTCCAAACCCTGTTCTCTCCATATCTTCTCTTCATTACCTTGATCTCAGGTTTAATGACTTCGAAGGCGAGGTTCCATCGGAGCTTTTCAACATTACATTAGATGCAATCTTCTTGAACAACAATAGGTTCACATCTGCGATTCCAGAGAGCATTGGAAGCTCTCCGGCCTCTGTGATTGTATTGGCCAACAACCACTTTCAGGGATGCATCCCGACAAGTATTGGTTCGATGGACACTACATTGAATGAGTTTGTTGTGACGAACAATAAGCTTACGGGGTGCTTGCCCCCGGAGATTGGAAAGCTTAGCCACATGGAAGTGTTTGACATTAGTGAGAACAACTTGGTTGGTGTGTTGCCAAGAACGTTGATGGGATTGAAGGAAGTGACGGTGTTGTCGATTGCAAACAACAAGCTTACTGGTTTTGTGCCAAAGAGCATATGTGAGTTGGAGAACTTAAAGAACTTCACGTTCTCGAATAACTACTTCAACGGTGAGGAAGAGGGTTGTAACCCTAAAACAAGAAAGGGGATCAAGTTGGATGATCAAAAGAATTGCATACCAGAAAGGCCAAAACAAAGGGATGGAAGCGCTTGTAATGCTGTCATAAGCAAGCCTGTTGATTGTAGCAAGGCACAGTGTGAGAAACCAATGCCAATAACACCGTCATCAAATACTCCTTCTAAACCTCCAAAGGAGAAACCAACTCCAACGCCCTCCTCACATAATAACAAGAAACCACGGCCTACACCTTCTCCAAATGAAAAGAAAACACCGTCGTCGCCAAAGCCAACTCCTTCTCCAACTAAGAAGCCAACATCAACACCACAGACTCCAACACCATCAAATCCAAAACCACCTAAAGCACCTAAGCATGATGATGATTATGATGATCATTATGAAGAACCTAAAGAACGAAATAGGCCTCCAAAATCTCCACCTCCATCTCCAGCTCCAGTAGTACATTCTCCTCCTCCTCCTCCTCCACCAGTCTACTCTCCACCACCTCCACCAGTCCATTCTCCACCACCACCTCCAGTTCACTCCCCACCACCACCCATCAACTCTCCACCACCACCTATCTACTCTCCTCCTCCACCAGTGCACTTCTCACCACCGCCTATCTACTCTCCTCCACCAGTAGTGCAATCCCCGCCACCACCCGTTTATTCTCCTCCTCCACCGGTTCAGTCCCCACCACCCCCACCACCAATTTACTCTCCTCCACCACCCGTTAACTTTCCTCCTCCACCGGTTTACTCCCCCCCACCGCCAATCTACTCTCCTCCACCACCCGCCTACTCTCCTCCTCCTCCTGTTGTTCATGCACCACCACCCCAAGAAGATAGTATCGTTATTCCACATGACTTTGGTTCTTCTTATGCTTCTCCTCCTCCACCAATCATCTCTGGCTACTAA 1944 0.4655 MHVLGCFLLLLSLFILSPSDAFSSDEASFIARRQLLTLEENADLPDDWVDNYQINLTFDNPRLKSAYIALEAWKHAIYSDPSNFTSNWVGPNVCSYNGVYCAPALDDPSIQVVAGIDLNHADIAGYIPSEIGLLTDLALLHINSNRFCGILPKSFSKLKLLYEIDISNNRFVGPFPNPVLSISSLHYLDLRFNDFEGEVPSELFNITLDAIFLNNNRFTSAIPESIGSSPASVIVLANNHFQGCIPTSIGSMDTTLNEFVVTNNKLTGCLPPEIGKLSHMEVFDISENNLVGVLPRTLMGLKEVTVLSIANNKLTGFVPKSICELENLKNFTFSNNYFNGEEEGCNPKTRKGIKLDDQKNCIPERPKQRDGSACNAVISKPVDCSKAQCEKPMPITPSSNTPSKPPKEKPTPTPSSHNNKKPRPTPSPNEKKTPSSPKPTPSPTKKPTSTPQTPTPSNPKPPKAPKHDDDYDDHYEEPKERNRPPKSPPPSPAPVVHSPPPPPPPVYSPPPPPVHSPPPPPVHSPPPPINSPPPPIYSPPPPVHFSPPPIYSPPPVVQSPPPPVYSPPPPVQSPPPPPPIYSPPPPVNFPPPPVYSPPPPIYSPPPPAYSPPPPVVHAPPPQEDSIVIPHDFGSSYASPPPPIISGY* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2474 647 Pfam Leucine rich repeat 279 337 IPR001611 GO:0005515
Ahy17g2474 647 SUPERFAMILY L domain-like 68 342 - -
Ahy17g2474 647 MobiDBLite consensus disorder prediction 462 484 - -
Ahy17g2474 647 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 573 - -
Ahy17g2474 647 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 2 573 - -
Ahy17g2474 647 MobiDBLite consensus disorder prediction 428 461 - -
Ahy17g2474 647 MobiDBLite consensus disorder prediction 612 647 - -
Ahy17g2474 647 Gene3D Ribonuclease Inhibitor 66 364 IPR032675 -
Ahy17g2474 647 MobiDBLite consensus disorder prediction 388 582 - -
Ahy17g2474 647 MobiDBLite consensus disorder prediction 398 421 - -
Ahy17g2474 647 MobiDBLite consensus disorder prediction 485 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2474 Ahy-Chr17 118421926 118424032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2474 21 455 Trihelix Transcription Factor Family AT4G33970 57.437 4.72e-168 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2474 - - ahf:112705802 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2474 17 118421926 118424032 Ahy8g0277 8 5700202 5702349 hybridization