Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2405 ATGGCTAAAGGGTTCAAGCTGAAATTCAATATCCCTTTATTCCAAATGTGTCGTTCAAAAGACCCTTCCGCTTTCCCAGGAAACCCTGTAGTTCCTGCAATATACCGTCTTTCTCCGGTGAACCCTAAAGAGCATGACGTTGGATACCCTTCAAGCCTGTTAGTACCTCCTCCGCCACCCTCCTCACCGGAACACAGGGGTAGTAAGGTCACTTCAAGAATCATGTCCTTACGCCAAATGTGCCGTGACGACCACCGCGACAAGCAAGTAAACACCAGAGGCAGAAGAAGCACATCCAGCGTTCCTTCCAGGAGAAGCAACGTGGCGGTTGACAACGAAGAAGAAAGCGAGTCTCTAATTTCTTGCACCACAAGTTTCTCGGACGATTCTTATTCTCTCAAACCGGAGAGAGATTTAGTTAGCAGCAGCAGTGGCAGCAGGAGGCACATGAGGAGGATAAGCAGCGTGAAGAAGGTTCAGAGAATGAGGTTCAACACTGCGAGATTAGAACTACCGGAAACAGAACAAGTAAAGAAGACAAAGACAAAGACGAAGACGAAGGTTGTGTCGACGGCATCAACCACAAGGATGAGGCGGAGCAGCGCGGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAGTCGAAGGATCCGTATGAGGACTTCAAGAGATCAATGGTGGAGATGATAAGGGAGATGGAGATGCGTGATGCAGAGGATTTGCAGCAACTGCTTCAGTGTTTCTTGGCTCTGAACTCCAGGTGCTATCACGATGTGATTGTGCGTGCTTTCATGGAGATATGGCAAGAGATGTTCGTTATGAAGCCTGCGTCCTCCAACACCAACGATATTCTCCAAAGAGATCAATTGCAACTAGGAGAGTAA 888 0.4865 MAKGFKLKFNIPLFQMCRSKDPSAFPGNPVVPAIYRLSPVNPKEHDVGYPSSLLVPPPPPSSPEHRGSKVTSRIMSLRQMCRDDHRDKQVNTRGRRSTSSVPSRRSNVAVDNEEESESLISCTTSFSDDSYSLKPERDLVSSSSGSRRHMRRISSVKKVQRMRFNTARLELPETEQVKKTKTKTKTKVVSTASTTRMRRSSAEGKVRESFAVVKKSKDPYEDFKRSMVEMIREMEMRDAEDLQQLLQCFLALNSRCYHDVIVRAFMEIWQEMFVMKPASSNTNDILQRDQLQLGE* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2405 295 MobiDBLite consensus disorder prediction 131 145 - -
Ahy17g2405 295 MobiDBLite consensus disorder prediction 78 93 - -
Ahy17g2405 295 ProSiteProfiles OVATE domain profile. 212 271 IPR006458 -
Ahy17g2405 295 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 210 272 IPR006458 -
Ahy17g2405 295 MobiDBLite consensus disorder prediction 48 152 - -
Ahy17g2405 295 MobiDBLite consensus disorder prediction 94 130 - -
Ahy17g2405 295 PANTHER TRANSCRIPTION REPRESSOR OFP7 60 276 - -
Ahy17g2405 295 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 276 IPR038933 GO:0045892
Ahy17g2405 295 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 62 IPR038933 GO:0045892
Ahy17g2405 295 Pfam Transcriptional repressor, ovate 216 273 IPR006458 -
Ahy17g2405 295 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2405 Ahy-Chr17 115217988 115219033 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ahy17g2405 Ovate 8.90E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2405 - - aip:107608440 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2405 17 115217988 115219033 Ahy17g2405 17 115217988 115219033 ECH
Ahy17g2405 17 115217988 115219033 Ahy8g0029 8 414366 415205 hybridization