Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2355 ATGTATCCCAACCAAGCATTTTCTTCAGGATCCTATGCTGAGATGTTGTCTGGGAATCCTTTATTGTCTCATAACTACAACAATAATGGATCTGTTGGAGCACCAAACATGGTTGATCCAGCATGCAATTCTTTTGTAGAAGGTGAACAAAATGTACATGGCCAAGGCTTATCTCTTAGTCTAGGTACATCTGTTCCTTCCTTTCAATACCAGTATGATGGCACTGCTTCTGCTGCTGCTGAATGCATGGTATCTTTATCTTCTGGAGGCTTTCATGAAAGTGCCAAAAGAGAGGGTTTGTACAATTCCAATAACTCTGATCCATGCATTCAAGGATCATTCTCAAACGGTGTATTGAACTCACACTATCTTAAGGCAGCACAGGAGTTACTTGATGAAATAGTTGGTGTCCGAAAGGCTTTGTTGAAGCAACCTGGAATGGAGAAACAAGAAAAGTTCAATAATGTCATTGATGGTGGCTCCAAGGATTCTGATGGAAAATGTAACAGTCAATCTCTGCAAAATAATGTCAAACCTCCTAATGAATTATCAGCTGAAGAACGCCAGAGTTTATTAGAAAAGAAGACAAAGCTTCTGACCTTGTTGGATGAGGTGGATAAGAAATACAGACAGTACTGTCATCAGATGCAGATTGTGGTGTCATCTTTCGACATGGTTGCCGGATGTGGAGCTGCTGAACCTTACACATGGCTTGCATTGCGCACCATATCTCGCCATTTTCGGAGCTTGCGCGATGCAATCAGTGGACAAATTCAAGTGATACAGAGGTGCCTTGGGGAACAAGAAGGGATACCGCGTCTTCGTTATGTTGATCAACAGCTTAGACAGCAAAAGGCACTTCAGCAACTTGGTGTAATGAGACAAGCTTGGAGGCCTCAGAGGGGTCTCCCCGAAACCTCTGTCTCAATACTTCGCGCTTGGCTTTTCGAACATTTTCTTCACCCGTATCCCAAGGATTCAGAGAAAATCATGCTGGCAAGACAGACAGGCCTGACCAGAAACCAGGTGGCAAATTGGTTCATCAATGCACGGGTGCGGCTATGGAAGCCGATGGTTGAAGAAATGTATAAAGAAGAGTTTGGTGATTCTGATAACATAAGCTGCAATATTCGATCCGAAGGCATTGTGAAAAGTAAAAGAGATGATGCTCAAGCCTCTGATAACAAAGGGGAAGATGATTCACAAGACAATTTAGCAACCCTTGCTGATAGTGTCCAACAAGAAGGGCATTTTCATAAACATGCATCATGTTCCATGGATGAGAACAACAATAATGGGGTTTATAGTTGTGGAAGCATAATGGGTTGTAGTACTAGTCCTGCTGCATATGATTTTGCAGAGTTGGGTAACTTTACATCTACCATGGGTGGCCACGTGTCTCTTGCATTGGAATTGAGGAACTGTGAAAGGGATGGGTTTGGTGGCATGTCTGATAATGATGGCATCCACAAGAAAAGACGTAATCATAATCAGGGTTTGGCTTCTTCTTCTTCTTCTTCCTCCCCAGAGACTGATCACCTGCTAGATTATCATTTCACAGATTCAGGAAAGCAACAACACAGGTTCAGCAGCAACCCTCATCTTCTGCATGAGTTTGTTGTCTGA 1626 0.4293 MYPNQAFSSGSYAEMLSGNPLLSHNYNNNGSVGAPNMVDPACNSFVEGEQNVHGQGLSLSLGTSVPSFQYQYDGTASAAAECMVSLSSGGFHESAKREGLYNSNNSDPCIQGSFSNGVLNSHYLKAAQELLDEIVGVRKALLKQPGMEKQEKFNNVIDGGSKDSDGKCNSQSLQNNVKPPNELSAEERQSLLEKKTKLLTLLDEVDKKYRQYCHQMQIVVSSFDMVAGCGAAEPYTWLALRTISRHFRSLRDAISGQIQVIQRCLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPETSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSDNISCNIRSEGIVKSKRDDAQASDNKGEDDSQDNLATLADSVQQEGHFHKHASCSMDENNNNGVYSCGSIMGCSTSPAAYDFAELGNFTSTMGGHVSLALELRNCERDGFGGMSDNDGIHKKRRNHNQGLASSSSSSSPETDHLLDYHFTDSGKQQHRFSSNPHLLHEFVV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2355 541 Pfam Associated with HOX 118 255 IPR006563 -
Ahy17g2355 541 CDD homeodomain 297 358 IPR001356 GO:0003677
Ahy17g2355 541 Gene3D - 294 372 - -
Ahy17g2355 541 SMART prehox3 112 256 IPR006563 -
Ahy17g2355 541 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 36 493 - -
Ahy17g2355 541 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 36 493 - -
Ahy17g2355 541 MobiDBLite consensus disorder prediction 164 183 - -
Ahy17g2355 541 SMART HOX_1 297 361 IPR001356 GO:0003677
Ahy17g2355 541 MobiDBLite consensus disorder prediction 483 515 - -
Ahy17g2355 541 ProSiteProfiles 'Homeobox' domain profile. 294 357 IPR001356 GO:0003677
Ahy17g2355 541 MobiDBLite consensus disorder prediction 498 513 - -
Ahy17g2355 541 MobiDBLite consensus disorder prediction 152 184 - -
Ahy17g2355 541 MobiDBLite consensus disorder prediction 384 403 - -
Ahy17g2355 541 Pfam Homeobox KN domain 314 353 IPR008422 GO:0003677|GO:0006355
Ahy17g2355 541 SUPERFAMILY Homeodomain-like 298 365 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2355 Ahy-Chr17 113511870 113515441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2355 102 540 Homeobox Transcription Factor Family AT2G16400 46.993 6.35e-113 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy17g2355 POX 2.00E-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2355 - - aip:107610078 973.77