Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2354 ATGAATGCTAATTTTATTTGTAAGTTCGTGATTGCTGCTCAGCTTTGTTTATTTCCTTTTATATATGCTGGTTTTGCAGTTTCAGGCCAAATGGACTTCGACCTTTACTCAAGCGATAACGATGAAGAGTCATCAGAGATGTCGTTGGGTGTGTGTGGTTCTTTAAGTTCCTCTGAAGATGACGACAGTACTAGCTTATTTGGCATGGGAACAAGTCACTCTGAATCAAACAAAGAATTGCATCGCTTACAGGGGGATGTTCACGGCAAGGTGCCTGTGTTACTTACCGCAGAGGACTTCTTGCATATAGTTTTCACTTCTGAGGAGGAGGCCTACAATGCTTACAAGGAGTTTGCCTGGACAAGGGGGTTTGGTGTTCGCAAGGGGGACGTGGGATGGGTTGACGGTGTTTTGGTGAGGCAGGACATCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATAGGCCAGAACGAGTAAGGGAGGAGCGGCTGGAGAGTCGCACGGACTGCAAGGCAAAATTGAAAATATACTATGATGTCCATGATAATGTGTGGAGAGTGCGAAAGATTATTGATGAACACAACCACGACATGGCTCCGGCTGCGTTTTGCAACCTGTTGCCAAGTCACCGAAAAATGAGCGATGGGGATAAGGCTCAAGTGAATAGCATGAAGCAATTTGGAATCCCTACCTCGAAGATAATGGCTTACATGGCAGGCCAATCGGGTGGCTACAGCATGCTTCGGTTTACAAAAAGGGATTTGTACAACTATGTTCACAATCAACGGCGAGCACGAATCTTGGATGGGGATGCAGCTGCAACTATAAGCTACTTAGAGGGGAAGGCAAATGCGGACCTTATGTCAGTCGCCAGATACACAACGACTGCAGATAATCGGTTGGGTAACTTATTTTGGGTGGACGGTATCATGAAATCCGATTATGAGTTGTTTGGTGATGTCCTTGCATTTAACGCGACATACCGTGGGAACAAGTACAAGAAACCTCTGGTGGTGTTCTCTGGGATAAATCATCACAGGCAAACTTGCATTTTTGGATTTGCATTGCTTCAAGATGAGGAGGTGCGCACTTACAAATGGGTTCTACTGAACCTTTTGGATGTCATGGGTCAAAGAAGACCTAACCTTGTTGTGACGGATGGGGATAAGGCAATGCGTGCTGCCATTGCGGAGGTAATGCCTTCAGCCAAGCACAGACTCTGTGCATGGCATCTGGAGAAAAATTGTTTCCAACGGGTAAAGGAAGCTGAATTTCGGAAAGTATTCAAAAAGGCTATCTATGCAAACTTTGATGTTGACGAGTTCGAGAGATATTGGAGGACCTCAATTGAGTCTCTCAGTCTAGGCCAAAATACATGGGTGCAATCGACATATGACATTAAAGAGAGTTGGGCAACGGCCTATCTGAGGGGGACCTTTTGCGCCGGATATAGGACAACGTCAAGATGTGAAGGAATCAACTCTTTCATTAAAGCGTTCCTAAAGTCAACGGATAGCATTCTTGAACTGGTTCACAGCTTGGACAGGGTCGTGAAAGACTATCGGAACAATGAGGTTACTGCACAATTTTACTCCACTTATTACACACCTGTGTTAAGTACTGGATTAGATGCAATAGAGTTGTCTGCGTCGAAGCTTTATACAAGAGCTGTTTTTAGGGAGGTTAAGAAGCAAATCAAGGGTGTTGCAACGCTATTGTTTCAGGGAAGGGAGAGCATCAACACGACCATTGTCTATAGCTTTAGTAAAATGGGTAGACCGGATCGGGTATTCAAGGTTCTCTATGATCCGAATGACCGAAAGATTGAGTGTGAGTGTAAGATGTGGGACAGTGATGGCATACCGTGTTCCCATATATTTTGTGTCATGAAGTACGAGGGTATGGAGGAAATTCCTGAAACACTTGTCCTTAGGCGCTGGTGTAAGATTGCAAAAGACTGTACAACATTGAAAACGGGGAATGATTCAAGGGATCAGGCAAGACTGCTGCGATACAGTGCATTATACTTAGCTTTGTCCCATGTTGTTACACTTGGGTGCGAAGAGGTTGAAGATTTTGCGCTTGCACATGATGCTATATCAAACCTGGTTGATATATTGCAACGGCGCCGTGTGGAAAAGGATGGTAACAAGGTTTTGCCCAACAACAAATGTGGGGTCAAAGACCCTACGATGGCAGCTACAAAGGGTGCACCGAAGAGGGGAAAAGCCAATTTATGTGCCTCCGAGGAGGAGCCGAAACTGAAGAGGCGTTGCACTAAGTGTGGGGTTCCCGGACATACAAGAAGAACATGTGCAGGCCACGATTTGAAGGCTGTACGAGTGGGATCAGAAGCAGCATCATCAGCTTTCGCCGAGTCTTCTTTTGCCCATGTAAAATCCACGGAACGATCCACGTCATTACGCAGGGAGGTCCCCTTCGAAGAGGGACCAAAGGTCACATCTAGCCGTAGCCAAGGAGGTGCACCATTAGGCATGACCCCTACTCAATCGAACGTGTCGCGGTTCGCACCTTCTGGAGGTGGAGGCAATATATTCTTGGGTGGGCAACGCATAGATCATTTTTATGCAACACCTACGTGTGGACCAACGTCATCCGTCCCGTGCTATTCTCCTTCTTTCGTCCCAGGTGTGATTCATAGCGGATCCCATGGTGCCTCGACAAGTCTTGGTAGCGAGGCAATTGAGAGGTGGATTCTGGAGGTAACTGTTTGA 2745 0.4638 MNANFICKFVIAAQLCLFPFIYAGFAVSGQMDFDLYSSDNDEESSEMSLGVCGSLSSSEDDDSTSLFGMGTSHSESNKELHRLQGDVHGKVPVLLTAEDFLHIVFTSEEEAYNAYKEFAWTRGFGVRKGDVGWVDGVLVRQDIFCHRQGTRSDKHYDRPERVREERLESRTDCKAKLKIYYDVHDNVWRVRKIIDEHNHDMAPAAFCNLLPSHRKMSDGDKAQVNSMKQFGIPTSKIMAYMAGQSGGYSMLRFTKRDLYNYVHNQRRARILDGDAAATISYLEGKANADLMSVARYTTTADNRLGNLFWVDGIMKSDYELFGDVLAFNATYRGNKYKKPLVVFSGINHHRQTCIFGFALLQDEEVRTYKWVLLNLLDVMGQRRPNLVVTDGDKAMRAAIAEVMPSAKHRLCAWHLEKNCFQRVKEAEFRKVFKKAIYANFDVDEFERYWRTSIESLSLGQNTWVQSTYDIKESWATAYLRGTFCAGYRTTSRCEGINSFIKAFLKSTDSILELVHSLDRVVKDYRNNEVTAQFYSTYYTPVLSTGLDAIELSASKLYTRAVFREVKKQIKGVATLLFQGRESINTTIVYSFSKMGRPDRVFKVLYDPNDRKIECECKMWDSDGIPCSHIFCVMKYEGMEEIPETLVLRRWCKIAKDCTTLKTGNDSRDQARLLRYSALYLALSHVVTLGCEEVEDFALAHDAISNLVDILQRRRVEKDGNKVLPNNKCGVKDPTMAATKGAPKRGKANLCASEEEPKLKRRCTKCGVPGHTRRTCAGHDLKAVRVGSEAASSAFAESSFAHVKSTERSTSLRREVPFEEGPKVTSSRSQGGAPLGMTPTQSNVSRFAPSGGGGNIFLGGQRIDHFYATPTCGPTSSVPCYSPSFVPGVIHSGSHGASTSLGSEAIERWILEVTV* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2354 914 ProSiteProfiles Zinc finger CCHC-type profile. 760 775 IPR001878 GO:0003676|GO:0008270
Ahy17g2354 914 Pfam FAR1 DNA-binding domain 115 202 IPR004330 -
Ahy17g2354 914 SMART 26again6 612 639 IPR006564 GO:0008270
Ahy17g2354 914 MobiDBLite consensus disorder prediction 805 836 - -
Ahy17g2354 914 ProSiteProfiles Zinc finger SWIM-type profile. 601 637 IPR007527 GO:0008270
Ahy17g2354 914 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 99 685 IPR031052 GO:0006355
Ahy17g2354 914 MobiDBLite consensus disorder prediction 822 836 - -
Ahy17g2354 914 MobiDBLite consensus disorder prediction 806 820 - -
Ahy17g2354 914 Pfam SWIM zinc finger 601 629 IPR007527 GO:0008270
Ahy17g2354 914 Pfam MULE transposase domain 324 418 IPR018289 -
Ahy17g2354 914 PANTHER OS02G0262500 PROTEIN 99 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2354 Ahy-Chr17 113417647 113420566 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g2354 MULE 1.20E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2354 - - ahf:112709549 1070.07