Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2351 ATGTTTCACTCTAAGCATCACTCTCTTACAAGAGCTCTCCTCTTCTTCCTCATCCACACTCCCCCTCTTCCATCTCCATCCATAAAATCTTACCTTCTTCTTCTGCCACAAACACGCCGCCACTCATACCTCTTCTCAACCACCTGCACTTCCGGTGACCACCACTCTTTCACTGTCTCCTACCTCACCACCAAGTGCGGCTTCTCCCATGAAGACGCTCTCAGAGCAAACAAGCGCGTTCGCTTTGACACCCCCGTCAAGCCAGATTCCGTCATCTCCTTCTTCAAAGCCCACGGTTTCTCACTCTCCCAAATCACCACCATCATATGCAGGTTTCCCGTGTTCCTCACATGCGACCCCGCCAATGCAATCTTGCCAAAGTTTCAATTTTTAGCATCCAAAGGTGCTTCTCCCTCTGACATTGTACTCATGACCACAAGGAGTTCCCGCTTCCTGCTTCGAAGCCTTGACCATATAGTATCCTTGTACGAATTGGTAAGGAGGTTCTGTCCCTCTGATCTTAAAGCCATTGCTTATATAACTGCATGGCCATCATCCATTGCTGATGATCGTGTGGCTCAAAATGTGAAATTGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACACTCTTATTTCAGTGTGGTGTTGCTGACCAAAAGGGCCATAACTAAGTCCAAATGGGAGGCTAAAGTTGATGTCCTTAAGAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTTTAGGAGGCACCCTAATTTTATGCTACGTTCCGAGGACAAACTCAACGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGATGCTTTTTGGATGCAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTTTCTTTGACTGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATCGGTCTCGCCTATTAACACTATATCAAGGAGGATGTTAG 1155 0.4632 MFHSKHHSLTRALLFFLIHTPPLPSPSIKSYLLLLPQTRRHSYLFSTTCTSGDHHSFTVSYLTTKCGFSHEDALRANKRVRFDTPVKPDSVISFFKAHGFSLSQITTIICRFPVFLTCDPANAILPKFQFLASKGASPSDIVLMTTRSSRFLLRSLDHIVSLYELVRRFCPSDLKAIAYITAWPSSIADDRVAQNVKLLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSHSYFSVVLLTKRAITKSKWEAKVDVLKKWGWSEQDFSEAFRRHPNFMLRSEDKLNAVMSFWISNLGWDSSALRIRPMLFGCSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKKCVTCFEEKDRSRLLTLYQGGC* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2351 384 Pfam mTERF 92 238 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 Pfam mTERF 188 360 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 SMART mt_12 210 238 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 PANTHER CGI-12 PROTEIN-RELATED 36 382 IPR003690 GO:0003690|GO:0006355
Ahy17g2351 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 382 - -
Ahy17g2351 384 Gene3D Transcription termination factor 3, mitochondrial 73 184 IPR038538 -
Ahy17g2351 384 Gene3D Transcription termination factor 3, mitochondrial 185 371 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2351 Ahy-Chr17 113263853 113265408 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy17g2351 mTERF 2.50E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2351 K15032 - gmx:102666739 330.487