Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2288 ATGAGATCATTCACATCACATGCTGTGCCTTCACGTACAGTAGTGAGAGACAGAGAAGAAGAACGGAGATGGCAGGGCACGAAGTTAGGTAGCCATGGATCACTTGCTGTGTTGTATATCTATAGAGAACTTGCATGCCGCAGTTCACAACAAACTTCACATCAATCCACAATGGCTATGAGAAAATCAAGTAGCAGGCTTGCTTCTCAAACAACAATGATCAAGCAAATGGTGAAGAGATGCTCCAGTTTAGGAAGGAAACAACAGCAGCAAGGTGAAGACGTTCCAAAGGGTCACTTTGTTGTTTATGTTGGTGGAGTTGGAGAGAAGAGAAGCAGGTACATTCTTCCCATCTCCTTCCTCAGCACACCACAGTTTCAGATCCTCCTTCATCAGGCAGAAGAAGAGTTTGGATTTGATCATCAAATGGGTCTCACCATTCCTTGTCAACAACATGTTTTTGAGTCTCTTACTTCCATGCTCAGATGA 489 0.4376 MRSFTSHAVPSRTVVRDREEERRWQGTKLGSHGSLAVLYIYRELACRSSQQTSHQSTMAMRKSSSRLASQTTMIKQMVKRCSSLGRKQQQQGEDVPKGHFVVYVGGVGEKRSRYILPISFLSTPQFQILLHQAEEEFGFDHQMGLTIPCQQHVFESLTSMLR* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2288 162 MobiDBLite consensus disorder prediction 1 22 - -
Ahy17g2288 162 Pfam Auxin responsive protein 75 161 IPR003676 GO:0009733
Ahy17g2288 162 PANTHER SMALL AUXIN-UP RNA-RELATED 65 162 - -
Ahy17g2288 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 65 162 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2288 Ahy-Chr17 110523479 110526472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2288 12 157 Calmodulin-binding Proteins AT3G43120 32.215 1.14e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2288 K14488 - han:110918230 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0881 15 12869441 12870135 Ahy17g2288 17 110523479 110526472 ECH
Ahy17g2288 17 110523479 110526472 Ahy15g0881 15 12869441 12870135 ECH
Ahy17g2288 17 110523479 110526472 Ahy17g2288 17 110523479 110526472 ECH
Ahy16g0073 16 648316 648908 Ahy17g2288 17 110523479 110526472 ECH
Ahy13g0781 13 8248963 8249883 Ahy17g2288 17 110523479 110526472 ECH
Ahy17g2288 17 110523479 110526472 Ahy8g0118 8 2229956 2232712 hybridization