Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2242 ATGGCTGTTTTTGTGAACAATAATAGTAATAATAATAATGGCTTAATGGTCCGTTTGAGTTTGATAGTATTGTTAGCTTTGTGGCAGACGACGAGTGCGTTGGTGAAACTGCCACCAAATGTTACAGTTCCTGCGGTGATAGCTTTTGGAGATTCAATAGTAGACCCTGGCAACAACAACGGCATTAAGACACTCGTCAAATGCAATTTCCCTCCGTACGGAAAGGATTTTCAGGGAGGCAACCCAACTGGTCGTTTTTGCAATGGAAAAATTCCTACCGACCTTCTTGTTGAAGAAATGAATATTAAGCAAACTTTGCCCGCATATTTGGATCCAAATCTACAACCAAGTGACCTTGTTACGGGAGTGTGCTTTGCTTCAGGTGCCTCTGGATACGATCCCTTGACGCCAAAAATAGCGTCAGTGATATCACTGTCGGAGCAACTAGAGATGTTCAAAGAGTACATAGGGAAGCTTAAACAGATAGTTGGAGAAGAAAGAACAAATGTCATCCTACAAAACAGTCTTTACCTTGTAGTGGCAGGAAGTGACGATATTGCCAATACCTATTTCGTTGCTCGCGTTAGACAACTCCAGTATGATATTCCTGCTTACACTGACCTTATGGTCAATTCAGCCTCTAATTTCGTTAAGGAGATATATGCTCTTGGAGCACGGAGAATTGGGGTACTGAGTGCACCACCAATTGGGTGTGTGCCTTCACAGAGAACTTTAGCTGGAGGCTTAGCAAGAGAGTGTGCTGAAGATTACAATTACGCGGCAAAATTATTTAACTCCAAACTGTCAAAAGAATTGGATTCTCTTAATCGCAACTCACCCAATAGTAGGATCGTTTACATTGATGTTTACAACCCCCTTCTTGATATCATTCTCAACTACCAAAATTATGGTTATAAAGTTGTGGACAGAGGTTGCTGTGGAACAGGGAAATTAGAGGTTGCAGTGTTGTGCAACCCTTTGGATGCCACTTGTCCAGATGCTTCAGAATATGTTTTTTGGGATAGTTATCATCCAACTGAATCAGTGTACAGACTCCTAATACGACAAGTTCTTGATAAGTACATCGAAAAATTGATATAA 1101 0.4105 MAVFVNNNSNNNNGLMVRLSLIVLLALWQTTSALVKLPPNVTVPAVIAFGDSIVDPGNNNGIKTLVKCNFPPYGKDFQGGNPTGRFCNGKIPTDLLVEEMNIKQTLPAYLDPNLQPSDLVTGVCFASGASGYDPLTPKIASVISLSEQLEMFKEYIGKLKQIVGEERTNVILQNSLYLVVAGSDDIANTYFVARVRQLQYDIPAYTDLMVNSASNFVKEIYALGARRIGVLSAPPIGCVPSQRTLAGGLARECAEDYNYAAKLFNSKLSKELDSLNRNSPNSRIVYIDVYNPLLDIILNYQNYGYKVVDRGCCGTGKLEVAVLCNPLDATCPDASEYVFWDSYHPTESVYRLLIRQVLDKYIEKLI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2242 366 CDD SGNH_plant_lipase_like 44 361 IPR035669 -
Ahy17g2242 366 Pfam GDSL-like Lipase/Acylhydrolase 46 354 IPR001087 GO:0016788
Ahy17g2242 366 SUPERFAMILY SGNH hydrolase 168 364 - -
Ahy17g2242 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 364 - -
Ahy17g2242 366 PANTHER GDSL ESTERASE/LIPASE EXL3 16 364 - -
Ahy17g2242 366 Gene3D SGNH hydrolase 37 363 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2242 Ahy-Chr17 108891752 108895465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2242 40 359 Pollen Coat Proteome AT1G75910 38.700 1.10e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2242 - - gmx:100793078 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2242 17 108891752 108895465 Ahy17g2242 17 108891752 108895465 ECH
Ahy16g0044 16 383388 393072 Ahy17g2242 17 108891752 108895465 PCT
Ahy6g1295 6 19572683 19575102 Ahy17g2242 17 108891752 108895465 PCT
Ahy17g2242 17 108891752 108895465 Ahy16g0046 16 409516 421639 PCT