Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2218 ATGGTGACGGAGTCGAAATCCGACACCGTGGTGTACCTCCATGGAGACCTCGATCTTCGGATCATTGAGGCTCGTTACCTCCCCAACATGGACATGCTCTCGGAGCGCTTCCGCAGATTCTTCTCTGCTCTAAACACATGCACCGCCTCCATCACCGGCAGGAAGAAGACCGAGAAGAGACACCGCCACGGAAAGATCATCACCAGCGACCCTTACGTCACCGTCTGCATCGCCGGCGCCACCGTGGCTCGAACCCGCGTCATTGCTAACTCTCAGAACCCTACCTGGAACGAGCATTTCAAGATCCCTCTGGCTCACCAGGCCACGGAGCTGGAATTTTACATCAAAGATAACGACATGTTCGGCGCAGACTTGATCGGAGTCGCATTCGTCTCCGCGGATAAGATCTTATCCGGCGAAACCGTCAGCAGCTGGTTCCCGATTATCGGCACCTCCGGTAGGCCTCCGAAACCTAATTGCGCGGTTAAGCTCGAGATGAAATTCACGAAATGCGAGGATTCTCCTCTGTACAGATCCAACATTGCACCAGAACCTAATCGGTTCGCCGTTCCGGATACGTATTTTCCGATTCGGCATGGAGGTTCGGTGACTCTGTACCAGGACGCGCACGTGCCGGATTCGATGCTGCCAGAGATTGGATTGGATGATGGAGTTGAGTTTCAGCAAGGTAAGTGCTGGGAAGATATCTGCCATTCGATCTTGGAGGCCCATCATTTGGTATACATTGTGGGTTGGTCCATTTACGATAAGGTGAAGCTCGTTAGAGAGCCCACTAGGCCTTTACCCAGCGGTGGAGATTTGAGCCTCGGTGAGTTGCTCAAGTACAAGTCTCAAGAAGGCGTTAGGGTCTTAATGTTGGTCTGGGATGACAAGACTTCGCACAATAAATTCTTCATTCACACGGATGGAGTAATGCAAACTCATGACGAAGAAACTCGAAGGTTCTTCAAGCATTCTTCAGTAACATGTGTGCTGTCACCTCGATATGCCAGCAGTAAGCTTAGCATTTTCAGGCAGCAGGTTGTTGGAACACTCTTCACGCATCATCAAAAATGTGTAATAGTTGATACTCAAGGACAGGGAAACCATAGAAAGATAACCGCATTTATAGGTGGTCTAGATCTTTGTGATGGGCGTTATGATACACCTGAGCACAGGATTGTCCGAGATCTTGACACTGTTTTTCAGAATGATCATCATAATCCTACATTTTCTGCAGGAGTCAAGTGTCCAAGGCAAGCATGGCATGACTTACATTGCAAAATTGAGGGTCCTGCTGTGTATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCGCTAGATGGTCTGAGTTGGGTAAAAAAATCAAGAGAGTATCGTATTGGCAAGATGATTCTCTCATCAAGTTGGAACGCATTTCTTGGATTCTCAGTCCTTCTGAGTCAGTTCCAAATGATCATCCTGACTTGTGGATTTCCAAGGAAGATGACCCCCAAAATTGGAACGTTCAGGTTTTTCGATCTATTGACTCTGGCTCAGTGAAAGGGTTTCCTAAGGATGTACTCGAAGCTGAGAATCAGAACCTCGTTTGTGCAAAAAATTTGGTGATTGACAAGAGTATTCAGACAGCATACATACATGCGATAAGATCTGCACAACATTTTATTTATATCGAGAATCAATATTTCATCGGATCATCCTTTGCATGGCCATCCTACAAAGAAGCAGGTGCTGATAACCTAATTCCTATGGAGTTAGCACTGAAGATAGTTAGTAAGATTAGATCCAAGGAGAGATTTACAGTTTATATTGTCATCCCAATGTTTCCTGAAGGTGTCCCTTCTTCTGTGGCAATGCAAGAGATTCTGTTTTGGCAGGGACAAACTATGCAGATGATGTATGACATCATAGCTCGGGAGTTAAAAGCTGCAAACCTTGAAGACAGCCATCCACAAGACTACCTGAACTTTTACTGTCTTGGAAACAGGGAGAATTTAACTGAAGTTCCAAACTCAAATGCTTCTGTGATTTCGAATACTAGCGAAACGGTTGCATCTTCCAAGTACAACCGTTTTATGGTTTATGTACATGCGAAAGGAATGGTTGTGGATGATGAATATGTTATACTCGGATCGGCCAACATTAATCAACGATCAATGGCTGGATCGAGAGATACAGAGATCGCAATGGGTGCATATCAACCCCATCATACATGGGCTAAGAAACAGAGGCATCCACATGGTCATGTATATGGGTACAGAATGTCTTTATGGGCGGAACACATGGGTTACATCGATGAATGCTTCAAGGAGCCTGAAACTTTGGAATGCGTCCAAATTGTGAACAAGATTGCTGAAGAGAACTGGAATAAGTATACAGCTGATTCTTTTGCACCAATGCAAGGGCACCTAATGAAATATCCTGTAAGAGTAGATGCAAATGGCAAGGTCAGCTGCTTACCCGGTTTTGAGACTTTCCCAGATGTTGGTGGCAAAGTACTTGGCTCACGCTCAACCCTTCCCTCTGCTCTAACAACATAG 2547 0.457 MVTESKSDTVVYLHGDLDLRIIEARYLPNMDMLSERFRRFFSALNTCTASITGRKKTEKRHRHGKIITSDPYVTVCIAGATVARTRVIANSQNPTWNEHFKIPLAHQATELEFYIKDNDMFGADLIGVAFVSADKILSGETVSSWFPIIGTSGRPPKPNCAVKLEMKFTKCEDSPLYRSNIAPEPNRFAVPDTYFPIRHGGSVTLYQDAHVPDSMLPEIGLDDGVEFQQGKCWEDICHSILEAHHLVYIVGWSIYDKVKLVREPTRPLPSGGDLSLGELLKYKSQEGVRVLMLVWDDKTSHNKFFIHTDGVMQTHDEETRRFFKHSSVTCVLSPRYASSKLSIFRQQVVGTLFTHHQKCVIVDTQGQGNHRKITAFIGGLDLCDGRYDTPEHRIVRDLDTVFQNDHHNPTFSAGVKCPRQAWHDLHCKIEGPAVYDILTNFEQRWRKAARWSELGKKIKRVSYWQDDSLIKLERISWILSPSESVPNDHPDLWISKEDDPQNWNVQVFRSIDSGSVKGFPKDVLEAENQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPMELALKIVSKIRSKERFTVYIVIPMFPEGVPSSVAMQEILFWQGQTMQMMYDIIARELKAANLEDSHPQDYLNFYCLGNRENLTEVPNSNASVISNTSETVASSKYNRFMVYVHAKGMVVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWAKKQRHPHGHVYGYRMSLWAEHMGYIDECFKEPETLECVQIVNKIAEENWNKYTADSFAPMQGHLMKYPVRVDANGKVSCLPGFETFPDVGGKVLGSRSTLPSALTT* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2218 848 ProSiteProfiles C2 domain profile. 1 146 IPR000008 -
Ahy17g2218 848 CDD C2_plant_PLD 10 169 - -
Ahy17g2218 848 Pfam PLD-like domain 548 731 IPR025202 -
Ahy17g2218 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 351 386 IPR001736 GO:0003824
Ahy17g2218 848 Pfam Phospholipase D C terminal 768 838 IPR024632 -
Ahy17g2218 848 PANTHER PHOSPHOLIPASE D 7 847 - -
Ahy17g2218 848 Pfam C2 domain 15 148 IPR000008 -
Ahy17g2218 848 SMART C2_3c 16 145 IPR000008 -
Ahy17g2218 848 PANTHER PHOSPHOLIPASE D 7 847 IPR015679 -
Ahy17g2218 848 Gene3D C2 domain 14 177 IPR035892 -
Ahy17g2218 848 Pfam Phospholipase D Active site motif 352 386 IPR001736 GO:0003824
Ahy17g2218 848 Gene3D Endonuclease Chain A 225 469 - -
Ahy17g2218 848 SUPERFAMILY Phospholipase D/nuclease 232 453 - -
Ahy17g2218 848 SUPERFAMILY Phospholipase D/nuclease 540 779 - -
Ahy17g2218 848 Gene3D Endonuclease Chain A 493 746 - -
Ahy17g2218 848 PIRSF PLD_plant 2 848 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Ahy17g2218 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 169 IPR035892 -
Ahy17g2218 848 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Ahy17g2218 848 SMART pld_4 351 386 IPR001736 GO:0003824
Ahy17g2218 848 SMART pld_4 694 721 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2218 Ahy-Chr17 106793407 106798020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2218 2 679 Phospholipase D Gene Family (Wang group) AT4G35790 64.799 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2218 K01115 - gmx:100795859 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2218 17 106793407 106798020 Ahy17g2218 17 106793407 106798020 ECH
Ahy17g2218 17 106793407 106798020 Ahy8g0158 8 2989417 2994001 hybridization