Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2204 ATGAGAGAGAGAGAGAGAGTAAATAGAGGGAAAGAGAAAATGCCGCTCAAGTTAGGAGGAGGAGCTGCTGCTTTTGGCGCCTTCTTAGTCCTATGTGTTGGTTTTTCTCTCTTTGCAGTTACCTTGGCTGAAGACCCGTACAGGTTCTTCAACTGGAACGTCACTTATGGCGATATTTACCCCCTTGGAGTTCGCCAAAGGGGAATACTTATCAATGGGCAATTTCCCGGTCCAGACATTCATTCAGTTACCAATGACAATCTCATCATCAATGTCTTCAACAGCTTGGATGAGCCTTTTCTCCTTTCCTGGAATGGGATCCAGCAGAGAAGGAACTCATTTGAAGATGGAGTGTTAGGAACAACATGCCCAATCCCACCAGGGAGGAACTTCACATACATTCTACAAGTGAAGGATCAGATTGGAAGCTTCTATTACTTCCCATCTCTTAATTTTCATAAAGCAGCTGGTGGTTTTGGAGGAATTAGGATCCTAAGCAGGCCTAGAATTCCAGTTCCATTCCCTGATCCAGCTGGTGATTACACTGTTCTCATTGGAGATTGGTACAAATCCAACCACACTACGTTGAAAGCTCATCTTGATAGAGGTAAGAAGTTGCCTTTGCCTGATGGCATTCTCATCAATGGTCGTGGGCCTAATGGAGCATATCTCAACGTCGAACAAGGAAAGACTTACAGGCTTAGAATATCAAACGTGGGGTTGCAACATTCGCTTAACTTTCGCATACAGAACCACAAATTGAAGCTGGTAGAAGTGGAAGGAACACACAGCCTACAAACCACATACTCCTCCCTTGACGTTCATGTGGGACAATCTTATTCGGTTCTAGTTACTGCAGACCAACCAGCACATGACTATTACATTGTTGTTTCCACTCGATTCAACTACAAGATCCTCACCACCACTGGAGTTCTTCACTATAGCAATTCTGGGGGCCAAGTTTCCGGTCCAATCCCTGGTGGACCTACCATCCAAATTGATTGGTCTTTGAACCAGGCCCGCTCCATAAGGACTAACCTTACGGCAAGTGGACCAAGGCCGAACCCTCAAGGATCATACCATTACGGTTTGATAAACACAACCAAGACCATAATTCTGGCAAGTTCAGCTGGTCAAGTGAACCGCAAGCAGAGATATGCAATCAACAGCGTGTCCTATGTTGCCCCAGACACTCCTCTTAAACTCGCCGACTACTTCAAGATCTCGGGTGTTTTCCGTGCTGGAAGCATCTCTGACAGACCCTATGGTGGTGGCATATACCTTGATACCTCTGTATTGCAAGCTGATTATAGATCCTTCGTTGAGATTGTCTTCCAAAACAACGAGAATATTGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTAGTTGGTATGGATGGAGGACAGTGGACAACTGCTAGCAGGAACAGTTACAATCTTAGGGATGCAATTGCACGTTGCACAACACAGGTATATCCTTATTCATGGACGGCTATATATGTTGCACTTGACAATGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATATCTTGGTCAACAGTTTTACTTGCGGGTTTACACAGATTCAAACTCAATTAGGGACGAATTTCCAGTTCCAAAGAATGCACTTCTTTGTGGTAAGGCAAGTGGAAGACACACACGTCCCCTTTGA 1689 0.4482 MRERERVNRGKEKMPLKLGGGAAAFGAFLVLCVGFSLFAVTLAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSFEDGVLGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLNFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDRGKKLPLPDGILINGRGPNGAYLNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHSLQTTYSSLDVHVGQSYSVLVTADQPAHDYYIVVSTRFNYKILTTTGVLHYSNSGGQVSGPIPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILASSAGQVNRKQRYAINSVSYVAPDTPLKLADYFKISGVFRAGSISDRPYGGGIYLDTSVLQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTASRNSYNLRDAIARCTTQVYPYSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTDSNSIRDEFPVPKNALLCGKASGRHTRPL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2204 562 Gene3D - 178 353 IPR008972 -
Ahy17g2204 562 CDD CuRO_3_AAO_like_1 396 516 IPR034275 GO:0005507
Ahy17g2204 562 Pfam Multicopper oxidase 180 316 IPR001117 -
Ahy17g2204 562 SUPERFAMILY Cupredoxins 174 354 IPR008972 -
Ahy17g2204 562 SUPERFAMILY Cupredoxins 364 553 IPR008972 -
Ahy17g2204 562 Gene3D - 47 168 IPR008972 -
Ahy17g2204 562 Pfam Multicopper oxidase 398 535 IPR011706 GO:0005507|GO:0016491
Ahy17g2204 562 Gene3D - 363 558 IPR008972 -
Ahy17g2204 562 CDD CuRO_1_AAO_like_1 49 164 IPR034273 GO:0005507
Ahy17g2204 562 Pfam Multicopper oxidase 54 167 IPR011707 GO:0005507
Ahy17g2204 562 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 26 555 - -
Ahy17g2204 562 PANTHER MULTI-COPPER OXIDASE 26 555 IPR045087 -
Ahy17g2204 562 SUPERFAMILY Cupredoxins 41 194 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2204 Ahy-Chr17 105563919 105568990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2204 - - aip:107609742 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2204 17 105563919 105568990 Ahy17g2204 17 105563919 105568990 ECH
Ahy17g2204 17 105563919 105568990 Ahy7g0023 7 139895 141833 hybridization
Ahy17g2204 17 105563919 105568990 Ahy8g0168 8 3240084 3245138 hybridization
Ahy16g0025 16 257237 261158 Ahy17g2204 17 105563919 105568990 PCT
Ahy17g2204 17 105563919 105568990 Ahy16g0025 16 257237 261158 PCT