Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2200 ATGCGTGTTTGGGTGTGCGTGTGTCTGAAGAAGCTGCTTCAAACACACTCACACCAACGGAAACATAACGGAGTTTACGTTATCTGCTTCCAACTAATGGGTTGTTGCCAATCTAATTCGAGCCGTCATAACTACCCTCATCCGCTTACGGTTGCTTCCTCCCCTAACGGCGCCAACAACAATAACAACAATAACACCGTTGTTACTGGTGCCTCCGCCGCTGCCTCTGCCGCCCTAGACGTCCCTCCTTTCTCTGAGTTCTCCCTCTCCGACCTCAAATCGGCCACCAACGGCTTTAGCTCCGATCACATCGTCTCCGAGAGCGGCGACAAAGCCCCCAATGTGGTCTATAAGGGTCGCCTCAACAATCATAACCGACGTTTGATTGCCGTCAAGAGATTCTCCAAATCGGCATGGCCCGACCCCAAGCAGTTCGCTGATGAGGCTTGGAGTGTTGGGAAATTGAGGCACCCTAGGCTTGCGAATTTGATTGGGTATTGCTGTGATGGGGATGAGAGGCTTCTCGTTGCAGAATACATGCCCAACGACACTCTCGCCAAACATCTTTTTCATTGGGAAAATCAGACAATTGAGTGGAGCATGCGATTAAGAGTTGCCCTGTCCATCACACAAGCATTGGATTATTGCAGTAATAAAGGTCACCCATTGTACCATGACCTGAATGCCTACAGAGTGCTATTTGATGAGAATGGTGATCCGAGGATTTCATGTTTTGGGCTGATTAAGAACAGTAGGGACGGCAAAAGTTATAGCACGAATCTTGCTTATACCCCTCCAGAGTACCTGAGAAACGGGAGGGTGACTCCAGAAAGTGTAATCTTCAGTTTTGGAACTGTGTTATTGGATCTACTAAGCGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATAAGGGGTAAAAATATTCTACGTCTAATGGATTCACACTTGGAGGGAAACTTTTCCACCGATGAGGCAACTGTGGTTTTCGACCTTGCCTCTAAGTGCTTGCAATATGAACCTCGAGAACGGCCCAAGATCAATGACCTTGTTACGACTCTGTCCAGACTGCAGAATAAACCCGATGTTCCATCATATGTCATGCTTGGCATTGCAAAGCACGAGGAAGCACCAGCACCGCCAACTCCCCAGCATCCTCTATCTCCAATGGGTGATGCTTGTTCTCGCATGGACCTTACAGCTATTCATCAGATATTGTTGATGACACACTATAAAGATGATGAAGGAACTAACGAGTTATCTTTCCAAGAATGGACTCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGGGGCGACCTGGCATTCCGTGATAAGGATTTCAAAACTTCAATTGAGTGTTACTCCCAGTTCATTGATGTGGGAACCATGGTTTCCCCAACCGTTTATGCGCGGAGAAGTCTTTGCTACCTGTTTTGCGATCAACCGGATGCTGCGCTGCGAGATGCAATGCAAGCTCAGTTGGTCTATCCGGACTGGGCGACGGCATTTTACATGCAGGCTGTTGCACTGTCCAAATTAAACATGGATAAGGATGCAGCTGACATGCTGAACGAGGCCGCTTCCTTAGAAGAGAAACGGCAAAGAGGAGGGAAATGA 1623 0.4794 MRVWVCVCLKKLLQTHSHQRKHNGVYVICFQLMGCCQSNSSRHNYPHPLTVASSPNGANNNNNNNTVVTGASAAASAALDVPPFSEFSLSDLKSATNGFSSDHIVSESGDKAPNVVYKGRLNNHNRRLIAVKRFSKSAWPDPKQFADEAWSVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWSMRLRVALSITQALDYCSNKGHPLYHDLNAYRVLFDENGDPRISCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILRLMDSHLEGNFSTDEATVVFDLASKCLQYEPRERPKINDLVTTLSRLQNKPDVPSYVMLGIAKHEEAPAPPTPQHPLSPMGDACSRMDLTAIHQILLMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTSIECYSQFIDVGTMVSPTVYARRSLCYLFCDQPDAALRDAMQAQLVYPDWATAFYMQAVALSKLNMDKDAADMLNEAASLEEKRQRGGK* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2200 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 33 539 - -
Ahy17g2200 540 Pfam Protein tyrosine and serine/threonine kinase 115 355 IPR001245 GO:0004672|GO:0006468
Ahy17g2200 540 SUPERFAMILY Protein kinase-like (PK-like) 82 365 IPR011009 -
Ahy17g2200 540 Gene3D Transferase(Phosphotransferase) domain 1 181 372 - -
Ahy17g2200 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 33 539 IPR045845 GO:0004672|GO:0009742
Ahy17g2200 540 Coils Coil 514 534 - -
Ahy17g2200 540 Gene3D Phosphorylase Kinase; domain 1 75 179 - -
Ahy17g2200 540 SUPERFAMILY TPR-like 436 533 IPR011990 GO:0005515
Ahy17g2200 540 Gene3D Tetratricopeptide repeat domain 431 538 IPR011990 GO:0005515
Ahy17g2200 540 ProSiteProfiles Protein kinase domain profile. 102 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2200 Ahy-Chr17 105411691 105416197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2200 43 367 Glycoside Hydrolase AT3G07070 32.584 8.46e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Ahy17g2200 PK_Tyr_Ser-Thr 7.10E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2200 K14500 - qsu:111999979 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2200 17 105411691 105416197 Ahy17g2200 17 105411691 105416197 ECH