Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2189 ATGAGCTCCTTCCGTGCCGCTCTCGTCGCTGCTTCTTCTCTCCTCGCTGGAGGTTTGCCATCATCTCTTCTCGTCGCTGTTAGTTCAGGAGAAGGTTACGAACCCGTACTAATCCAGAGGAAGAAGAGGATCCTGAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACCAAGACCCTTGACAAGAACATAGATATTGCATTATCTTGCTGCAGGCAGGAGGTCTTGTTTTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAAGAAAGAGAGCAAGGCATTCAAGAAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGATCTTGCTGTGTTTGTGCATGAACAGGAAGCTATGATTGATGATATTGGGTCCAACATTGAGCAGTCTCATGCAGCAATTGCACAAGCAAGATCGCAACTTGCTAAAGCTTCAAAGACTCAAAGATCAAATTCTTCTTTGGTAATATACATTGTGTAA 498 0.4257 MSSFRAALVAASSLLAGGLPSSLLVAVSSGEGYEPVLIQRKKRILKQRLKVPPALNQFTKTLDKNIDIALSCCRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVFVHEQEAMIDDIGSNIEQSHAAIAQARSQLAKASKTQRSNSSLVIYIV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2189 165 Pfam SNARE domain 125 165 IPR000727 -
Ahy17g2189 165 Gene3D - 34 77 IPR029064 -
Ahy17g2189 165 PANTHER SYNTAXIN 71 162 IPR045242 -
Ahy17g2189 165 SUPERFAMILY SNARE fusion complex 77 151 - -
Ahy17g2189 165 SMART tSNARE_6 83 150 IPR000727 -
Ahy17g2189 165 ProSitePatterns Syntaxin / epimorphin family signature. 94 133 IPR006012 GO:0005484|GO:0006886|GO:0016020
Ahy17g2189 165 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 88 150 IPR000727 -
Ahy17g2189 165 Gene3D - 82 165 - -
Ahy17g2189 165 PANTHER SYNTAXIN OF PLANTS PROTEIN 71 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2189 Ahy-Chr17 104613796 104614921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2189 74 165 SNARE and Associated Proteins AT5G46860 69.565 7.66e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2189 - K08488 gmx:100811200 118.627