Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2169 ATGAGAGATGGTGGAGTGTTATCTTCAGATGGTTGCTGGTTAGCAGCTTCTTCTTCTTCTGCTGCTGCTGCTGCCGATGGATCTGCTGATTTCTATGTGTCAAGTCCTTCTTTTTCAAACCCCATATTTGATCCTTTCTCTTGGCCTTCCTTGGATACTGAACAAATTGAATCCCAAGAACGAGAACAGGAACATGAACAACAACAAGAACAACCACCTTTTAGCCATGACTTAGTTGTTGCTGCTAATAATTGTAGCCAGAATCAGCAACAACAGTATCATCACTATGAGAATCAGTCAGTGGAAAACAATAATCCAAATCCTAATAATCCTTCTGAGTTTTTCAGAAGGTGGTGGATTGCACCAAGTTCTAATCCGGGACCTGGATCTTATGTAGTTGAGAAGCTATTGAAGGCACTCATGTGTATCAAAGATGTGAACAGAAACAAAGACATGCTTATACAAATATGGATTCCAGTTATAAACAGAGGAGGCACTCAGATTCTCAGAACCAATGGGCTTCCATTCTCACTTGAATCAAGCTCTGTGAACCTTGCAAAGTACAGGGAAATTTCGGAGGTGTACCAGTTCTCCGCCGAGGAGGATTCGAAGGAGTTGGTGCCCGGATTGCCAGGGAGAGTTTACAAGGAGAAGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTCAGGAGCTATGAATATCCAAGAGTTGACCATGCTCAAGTCTATGATGTGAGAGGATCATTGGCACTTCCAATCTTTGAGCAAGGTAGCAAGAATTGCTTAGGTGTTGTTGAAGTTGTCATGACTCAACAGAAAATCAACTATCGCCCTGAACTTGAAAGTGTTTGCCAAGCACTTGAGGCTGTTAATCTTACAAGCTCAAAACTTCCAACTATTCAGAATGTGAAGCGTACATCATGTGAAAAGTCCTATGAAACTGCATTGCCTGAGATTCAAGAAGTATTAAGATCTGCATGTGAAATTCACAAATTGCCATTGGCACAGACATGGATTCCATGCATCAAACAAGGCAAAGAAGGATGCCGGCACTCGGAAGACAACTATCCACACTGCATATCTCCAGTGGAGCATGCTTGCTATGTTGGTGACCCTTCAATCCAGGTCTTTCATGAGGCATGCTCTGAGCATCACTTGTTAAAAGGCCAAGGTGTTGCCGGCGGAGCATTCATGACGAATCAGCCTTGCTTCGCACCCGACATAACTTTGTTAAGCAAGACAGACTATCCACTTTCTCATCATGCAAGGATGTTTGGATTGCGCGCTGCAGTCGCCATACGCTTGCGAAGCATCTATAATAGTTCAGATGACTTTGTTCTTGAGTTCTTCTTGCCTTTGGAATGCATTGACAATGATGAACAGAAGAAGATGCTCACTTCATTGTCCTTGATCATACAAAGGGTTTGCCATAGCTTGAGGGTTATATCAGATAAGGAAGTGGAGGAGGAAACTGATTTTTCAGCTGAAGTGATAGCTCATGAAGATAGTGGCACTTTTGCTAGTGCTGCAGCGTGGCCAGAACCACTGCAGAGTCAAATTGTTGCTTCATTGGGTGCTCAAGAAAAATCAAGTGAAACTATGGGGACGAGTTTCTCCGACCAAAGGCAACAACAGCAAGAGAGTTCTGTTTTGAAAGGGAACCTTGACTCTAATGGGGAGTGTTCTACTTATAATGTCGGAAACTTGTCAAGTAAAACCGGAGACAAGAAGAAGAGCAAAGTAGATAAGACTATCACTCTGCAAGTTCTTCGCCAACACTTCGCCGGAAGCCTAAAAGATGCAGCAAAGAACATTGGTGTTTGTACTACAACCTTAAAAAGGATCTGCCGGCAACATGGGATAAAACGTTGGCCTTCAAGGAAGATCAAGAAGGTTGGTCATTCCTTGCAGAAGCTTCAACTTGTGATTGACTCAGTCCAAGGTGCTTCTGGTGCATTCCAAATAGATTCCTTCTATTCAAAATTCCCAGACTTAGCTGCTTCTCCAAATCTATCAGGAACAAGCCTGTTCTCAAATCTCAAGCAATGTGATAATAATCCAAACTCACTAAGCATACAGCCGGATCCTGGTTCGCTGAGTCCGGAAGGCGCATCAAAATCGCCGTCCTCTTCTTGCAGCCAGAGCTCGATTTCTAGCCATCCATGTTCCAGCATGGCTGAGCAACAGAATCATCATCACACAAATAATAATTTTGATAGTAGCAAAGATCAAATGGTGTTATTGGTTGGAGAGAATTCTAGCGGCGATGGCTTGTTGAAGAGGATAAGAAGTGAAGCAGAATTGAAAAGCTTGAATGAAGATAGAGCAAAAGTAGTCATGCCAAGATCGCAAAGTCAAGAAACACTTGGTCAACATAACCTTAAAAATGGGCACCATGGATCATTGTCAAGAACCAAAAGCAAAGGGACTCAAAAGGAGGATGCACCTTATAGAGTGAAAGTAACATATGGGGATGAGAAAGCAAGGTTCAAGATGCCAAAGAATTGGGGATATGAAGATCTTGTGCAAGAAGTTGGTAGGAGATTCTGCATAAGTGACATGAACAAATTTGATCTCAAATATTTGGATGATGATTATGAATGGGTGCTACTAACCTGTGATGATGATTTAGAAGAATGCATTGAAGTTTGTCAATCATCTGAGAGCACCACCATCAAGCTTTGTCTTCAATTCTCTAATACTAATCATAGTATGCGAAACCCTTTAGAATTTAGATAG 2739 0.4224 MRDGGVLSSDGCWLAASSSSAAAAADGSADFYVSSPSFSNPIFDPFSWPSLDTEQIESQEREQEHEQQQEQPPFSHDLVVAANNCSQNQQQQYHHYENQSVENNNPNPNNPSEFFRRWWIAPSSNPGPGSYVVEKLLKALMCIKDVNRNKDMLIQIWIPVINRGGTQILRTNGLPFSLESSSVNLAKYREISEVYQFSAEEDSKELVPGLPGRVYKEKVPEWTPDVRFFRSYEYPRVDHAQVYDVRGSLALPIFEQGSKNCLGVVEVVMTQQKINYRPELESVCQALEAVNLTSSKLPTIQNVKRTSCEKSYETALPEIQEVLRSACEIHKLPLAQTWIPCIKQGKEGCRHSEDNYPHCISPVEHACYVGDPSIQVFHEACSEHHLLKGQGVAGGAFMTNQPCFAPDITLLSKTDYPLSHHARMFGLRAAVAIRLRSIYNSSDDFVLEFFLPLECIDNDEQKKMLTSLSLIIQRVCHSLRVISDKEVEEETDFSAEVIAHEDSGTFASAAAWPEPLQSQIVASLGAQEKSSETMGTSFSDQRQQQQESSVLKGNLDSNGECSTYNVGNLSSKTGDKKKSKVDKTITLQVLRQHFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGAFQIDSFYSKFPDLAASPNLSGTSLFSNLKQCDNNPNSLSIQPDPGSLSPEGASKSPSSSCSQSSISSHPCSSMAEQQNHHHTNNNFDSSKDQMVLLVGENSSGDGLLKRIRSEAELKSLNEDRAKVVMPRSQSQETLGQHNLKNGHHGSLSRTKSKGTQKEDAPYRVKVTYGDEKARFKMPKNWGYEDLVQEVGRRFCISDMNKFDLKYLDDDYEWVLLTCDDDLEECIEVCQSSESTTIKLCLQFSNTNHSMRNPLEFR* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2169 912 MobiDBLite consensus disorder prediction 779 804 - -
Ahy17g2169 912 MobiDBLite consensus disorder prediction 53 72 - -
Ahy17g2169 912 ProSiteProfiles RWP-RK domain profile. 571 652 IPR003035 -
Ahy17g2169 912 MobiDBLite consensus disorder prediction 773 814 - -
Ahy17g2169 912 Pfam PB1 domain 817 897 IPR000270 GO:0005515
Ahy17g2169 912 PANTHER PROTEIN NLP8 7 902 IPR045012 GO:0003700
Ahy17g2169 912 MobiDBLite consensus disorder prediction 55 71 - -
Ahy17g2169 912 Pfam RWP-RK domain 584 632 IPR003035 -
Ahy17g2169 912 MobiDBLite consensus disorder prediction 531 556 - -
Ahy17g2169 912 PANTHER PROTEIN NLP4 7 902 - -
Ahy17g2169 912 ProSiteProfiles PB1 domain profile. 816 899 IPR000270 GO:0005515
Ahy17g2169 912 Coils Coil 51 71 - -
Ahy17g2169 912 SMART PB1_new 816 899 IPR000270 GO:0005515
Ahy17g2169 912 CDD PB1_NLP 818 897 IPR034891 -
Ahy17g2169 912 Gene3D - 817 898 - -
Ahy17g2169 912 MobiDBLite consensus disorder prediction 686 739 - -
Ahy17g2169 912 SUPERFAMILY CAD & PB1 domains 810 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2169 Ahy-Chr17 103607837 103612203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2169 112 897 NLP Transcription Factor Family AT4G35270 45.335 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy17g2169 PB1 1.00E-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2169 - - ahf:112705709 1669.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2169 17 103607837 103612203 Ahy17g2169 17 103607837 103612203 ECH