Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2149 ATGTCTCTTTCCTTCAGTTTGCAACAGTCACGTGATTCCCATCTCTTCTTGTTGCTTCTCATTTTCAAGCCTCTACCAATATTGGCAGATAGCGGATTGGCACCACAAGCCACAGTTTCAGCTTTGCGGTTCATGGAGACTGATGTAGCTGCTATAATAGGTCCCCAATCTTCTGTTGTAGCTCACATCATATCCCATGTTGCGAATGAGCTTCGAGTTCCTCTGGTGTCGTTTGCTGCCACAGATCCTACTCTTACCTCCCTGCAGTTCCCATTCTTTGTGAGGACAACACAGAGTGATCTGTATCAAATGACTGCGGTTGCGGAGATCATAGACTATTATGGTTGGAAGGAGGTGATTGCCATCTATTTAGATGATGATTATGGACGAAATGGTGTTTCTGTGTTGGATGATCAGCTGGCTGCTCGGCGCTGCAAAATATCCTACAAGGCTGCAATCAAATCTGGATCAGTTGACCGGGGAGAGATCACGAATTTGCTTGTGCAAGTGGCTCTGATGCAATCTCGGATCATTGTTCTTCATACAAATCCTGATTCTGGATTTATGGTCTTCAATGTGGCGCATTATCTTGGGATGACAACCAATGGCTATGTCTGGATAGCCACGGATTGGCTCTCATCTGTCTTGGATTCTACTTCTCTACCTTCAGAAACAATGGATATTCTTCAAGGAGTACTTGTTTTGCGCCAACATACACCCGATTCTGATAGAAAGAAATCATTTATCTCTACATGGAACAAGTTAACTGGCGGCTCTTTGGGGCTACATTCCTATGGTCTCTATGCTTATGATTCTGTCTTTCTGTTAGCGCACGCTCTCGATGCATTCTTTAGTCAGGGTGGGATTGTTTCGTGTACCAACTACACGAGTTTGCGCGATGATAAGCCTGGTGGTCTGAACCTTGATGCTATGAGCATTTTTGACAATGGAACACTTCTGCTGAAGAACATAGAGCAAAGTGATTTTCTTGGATTAACAGGTCATGTGAAATTTGCACCAGACAGATGCCTTGTTCGTCCTGCATATGATGTTATCAATGTGGTTGGAACTGGCATTCATCGGGTAGGTTACTGGTCGAACTATTCTGGTCTCTCAATTGTGCCTCCAGAGACATTGTATGCTAAGCCGGCTAATAAATCAAGTGCAAACCAGCACCTTCATAGTGTCATATGGCCTGGAGATACATTATCAAAACCCCGTGGATGGGTTTTCCCAAATAATGGAAGGCAATTGAGAATTGGTGTGCCTGTTCGAGTTGGTTTCCGCGAATTTGTTTCGCGGGTGCAGGGGACTGATATGTTTAAAGGTTTCTCTATTGATGTATTCACTGCAGCTGTGAACTTGTTACCATATGCTGTTCCATACCACTTTGTCCCATTTGGAAATGGCCGCGAGAATCCAAGCTACACAGAACTTGTCAATTTAATCACCACAGGTTACTTTGACGGTGCTGTTGGTGACATTGCCATCATCACGAATCGGACAAAGATCGTAGATTTCACACAGCCATATGCTGCATCTGGACTAGTTGTGGTGGCCCCTTTTAAGAAAATCAATTCTGGAGGATGGTCTTTCCTTCGGCCATTCACACCATTTATGTGGACTGTGACTGCTTGTTTCTTCTTTTTCATTGGAATAGTTGTATGGGTTCTGGAACACAGAATCAATGATGAGTTCAGAGGCCCACCAAAACAACAATTCATAACAATTTTATGGTTTAGCCTTTCAACTCTCTTCTTTTCCCATAGAGAGAATACCATGAGCACTCTCGGTAGATTGGTGGTTCTGATCTGGCTGTTTGTAGTGTTGATCATAAACTCCAGCTACACTGCAAGTTTAACATCCATACTCACTGTGCAGCAGCTATCTTCCCCTATCAGTGGAATCGATAGCTTAAAGAATAGTAATGAACGCATAGGATTCCAAGTGGGTTCATTCGCGGAGCACTATTTGGTTGAGGACATCGGGATATCCGAAAATAGACTCGTTCGCCTAGGATCTCCAGATGCATATGCTAAGGCACTCCAACTTGGTTCTAAGAATGGAGGTGTTGGTGCCATTGTTGATGAAAGACCATACATTGAAATCTTCTTATCAACACAATGCACATTCAAAATTGTAGGCCAGGAGTTCACCCGAAGTGGCTGGGGTTTTGCATTCCCTCGCGACTCCCCATTAGCCGTGGATTTGTCAACTGCTATTCTACAACTTTCGGAAACAGGGGATCTGCAGCGGATTCATGATAAGTGGATGACAAGAAGCAGCTGTAGTTTAGATAATGCCGAGATTGATTCGGATAGGCTTCAGTTGAAAAGCTTCTGGGGACTGTTCCTCCTTTGTGGGATGGCTTGCTTCATAGCTCTTGTCATACATTTTGTGCAAATTATGGTGCGGATGTGGCATGCACCTCCTCCTGAAGCTGCATCTAATGGTAGCTCCATTTCTGGTCGTTTTCAAAGGTTTCTGTCACTGATTGATGAGAAGGAAGAGTCACCAAGGAGTGAGAGAAGAAAGAGGAACGGAGATGAAGGATCTGCTGCTGATCATCAACTTGATGGGAGGCACACAAAGAAGATACAGTTTGATTTAACACCCAACTCAAACAGATAA 2631 0.4398 MSLSFSLQQSRDSHLFLLLLIFKPLPILADSGLAPQATVSALRFMETDVAAIIGPQSSVVAHIISHVANELRVPLVSFAATDPTLTSLQFPFFVRTTQSDLYQMTAVAEIIDYYGWKEVIAIYLDDDYGRNGVSVLDDQLAARRCKISYKAAIKSGSVDRGEITNLLVQVALMQSRIIVLHTNPDSGFMVFNVAHYLGMTTNGYVWIATDWLSSVLDSTSLPSETMDILQGVLVLRQHTPDSDRKKSFISTWNKLTGGSLGLHSYGLYAYDSVFLLAHALDAFFSQGGIVSCTNYTSLRDDKPGGLNLDAMSIFDNGTLLLKNIEQSDFLGLTGHVKFAPDRCLVRPAYDVINVVGTGIHRVGYWSNYSGLSIVPPETLYAKPANKSSANQHLHSVIWPGDTLSKPRGWVFPNNGRQLRIGVPVRVGFREFVSRVQGTDMFKGFSIDVFTAAVNLLPYAVPYHFVPFGNGRENPSYTELVNLITTGYFDGAVGDIAIITNRTKIVDFTQPYAASGLVVVAPFKKINSGGWSFLRPFTPFMWTVTACFFFFIGIVVWVLEHRINDEFRGPPKQQFITILWFSLSTLFFSHRENTMSTLGRLVVLIWLFVVLIINSSYTASLTSILTVQQLSSPISGIDSLKNSNERIGFQVGSFAEHYLVEDIGISENRLVRLGSPDAYAKALQLGSKNGGVGAIVDERPYIEIFLSTQCTFKIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSETGDLQRIHDKWMTRSSCSLDNAEIDSDRLQLKSFWGLFLLCGMACFIALVIHFVQIMVRMWHAPPPEAASNGSSISGRFQRFLSLIDEKEESPRSERRKRNGDEGSAADHQLDGRHTKKIQFDLTPNSNR* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2149 876 CDD GluR_Plant 416 757 - -
Ahy17g2149 876 Pfam Receptor family ligand binding region 36 356 IPR001828 -
Ahy17g2149 876 Pfam Ligand-gated ion channel 760 791 IPR001320 GO:0015276|GO:0016020
Ahy17g2149 876 SUPERFAMILY Periplasmic binding protein-like II 394 760 - -
Ahy17g2149 876 PIRSF IGluLR_plant 26 875 IPR017103 -
Ahy17g2149 876 Pfam Bacterial extracellular solute-binding proteins, family 3 438 759 IPR001638 -
Ahy17g2149 876 Gene3D - 690 723 - -
Ahy17g2149 876 SUPERFAMILY Periplasmic binding protein-like I 36 410 IPR028082 -
Ahy17g2149 876 SMART GluR_14 419 760 IPR001320 GO:0015276|GO:0016020
Ahy17g2149 876 PANTHER GLUTAMATE RECEPTOR 3.3 38 857 - -
Ahy17g2149 876 Gene3D - 99 371 - -
Ahy17g2149 876 Gene3D - 527 661 - -
Ahy17g2149 876 Gene3D - 413 526 - -
Ahy17g2149 876 PRINTS Metabotropic glutamate GPCR signature 52 78 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy17g2149 876 PRINTS Metabotropic glutamate GPCR signature 119 136 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy17g2149 876 PRINTS Metabotropic glutamate GPCR signature 84 103 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy17g2149 876 PRINTS Metabotropic glutamate GPCR signature 103 119 IPR000337 GO:0004930|GO:0007186|GO:0016021
Ahy17g2149 876 MobiDBLite consensus disorder prediction 833 876 - -
Ahy17g2149 876 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 857 - -
Ahy17g2149 876 MobiDBLite consensus disorder prediction 833 866 - -
Ahy17g2149 876 CDD PBP1_GABAb_receptor_plant 26 375 IPR044440 -
Ahy17g2149 876 Gene3D - 36 346 - -
Ahy17g2149 876 Gene3D - 724 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2149 Ahy-Chr17 103058449 103062788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2149 39 855 Ion Channels AT1G42540 64.777 0.0 1143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2149 K05387 - gmx:102661260 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2149 17 103058449 103062788 Ahy17g2149 17 103058449 103062788 ECH