Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2116 ATGGAGGATGGCCCCGAGTGGCTAGTTGATAACTCTCATGGAAATTTAGAAATGGAGGTTGTTGAAGATGACGATGCCGCTTTGCAGCGCCAGCACCATTCAGAAAAGGATCAGAATGTGGATTCCAACTCCCCTGCTCAGCTCCAACAGGATCATGTCATGTTCGATCGGCAAAGTGATGACAACAAGAATGCCAATTCTGCTCTTCTTTCTGTGCTAGAGACCAAGACGGATAGTAGTAACACGCGCCTTGAGAATCGCCTTCAAGATCCTAAAGTCCATTCGCACCATGAATTACTCACTCCGAAGCCTAAAGAGAGGAATGTTAGGGAAATGAAAAACGTGCTCCATGATACTGAGATGACTGATTATGATGAGTCTGGTTCGTATTCCGAACGAGAAGCATTTATGAGAGAGCTGGAGAGTTTCTATAGAGAGAGATCCTTGGAGTTCAAGCCTCCTAAGTTTTATGGAGAGCCACTAAATTGCCTCAAGTTATGGAGAGCTGTCATCAAACTTGGTGGCTATGATGTGGTAACTGGATCCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCATCCACCCAAGACTTGCACTACAGTCTCATGGACGTTTAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGTATAAGAGAGAAATTGGGGAGCTACAGCTCCCTGTTGGATCATTTCATCAATCTTCAAGTGTGGAAAAAGAGACTGCTGTTTACCAGGCTCCAGGCTCTGGCTCTGGTAGGGCACGAAGGGATGCGGCAGCACGTGCAATGCAAGGTTGGCATGCCCAGCGCCTACTTGGATATGGTGAGGTTGCTGAGCCAGTTATTAAGGATAAGAACTCCAATTCTACTCCGAAACGAGAAAAGAACCTCAAAAGTATTGGTATGCTAAATAAACACAGGACACCATCTGTTCTTGAGCATGCTGGGAAAGCTGCAAATATTGAAGGAGATAGACAATTGGTCACGGCAGTTGTAGATGTTGGACCCCCAGCAGACTGGGTGAAGGTCAATGTGCGAGAAACTAAGGATTGTTTTGAGGTTTATGCACTAGTTCCTGGACTCCTTCGCGAGGAGGTGCGAGTCCAATCTGATCCAGTTGGTCGTCTAGTTATAACTGGTCTCCCAGAACATGTTGACAATCCATGGGGAATTACCCCCTTCAAGAAGGTTGTGAACTTACCTGCAAGAATTGATCCGCTTCAGACATCTGCTGTAGTTAGTTTGCATGGCCGACTGTTTGTACGTGTTCCCTTTGAGCAGGGAGCTGTGTAA 1299 0.4596 MEDGPEWLVDNSHGNLEMEVVEDDDAALQRQHHSEKDQNVDSNSPAQLQQDHVMFDRQSDDNKNANSALLSVLETKTDSSNTRLENRLQDPKVHSHHELLTPKPKERNVREMKNVLHDTEMTDYDESGSYSEREAFMRELESFYRERSLEFKPPKFYGEPLNCLKLWRAVIKLGGYDVVTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKYKREIGELQLPVGSFHQSSSVEKETAVYQAPGSGSGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNSNSTPKREKNLKSIGMLNKHRTPSVLEHAGKAANIEGDRQLVTAVVDVGPPADWVKVNVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGLPEHVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2116 432 Gene3D - 130 228 IPR036431 GO:0003677
Ahy17g2116 432 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 331 432 IPR002068 -
Ahy17g2116 432 Pfam ARID/BRIGHT DNA binding domain 132 217 IPR001606 GO:0003677
Ahy17g2116 432 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 29 429 IPR045147 GO:0006357
Ahy17g2116 432 SUPERFAMILY ARID-like 120 228 IPR036431 GO:0003677
Ahy17g2116 432 MobiDBLite consensus disorder prediction 23 39 - -
Ahy17g2116 432 CDD ACD_sHsps_p23-like 347 426 - -
Ahy17g2116 432 MobiDBLite consensus disorder prediction 60 79 - -
Ahy17g2116 432 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 29 429 - -
Ahy17g2116 432 SMART ARID_2 127 217 - -
Ahy17g2116 432 MobiDBLite consensus disorder prediction 80 99 - -
Ahy17g2116 432 ProSiteProfiles ARID domain profile. 130 221 IPR001606 GO:0003677
Ahy17g2116 432 Gene3D - 333 431 IPR008978 -
Ahy17g2116 432 SMART bright_3 131 222 IPR001606 GO:0003677
Ahy17g2116 432 CDD ARID 132 217 - -
Ahy17g2116 432 MobiDBLite consensus disorder prediction 23 99 - -
Ahy17g2116 432 SUPERFAMILY HSP20-like chaperones 340 427 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2116 Ahy-Chr17 100883423 100888404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2116 101 429 ARID Transcription Factor Family AT1G76510 68.769 3.08e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Ahy17g2116 ARID 4.60E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2116 - - adu:107461292 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2116 17 100883423 100888404 Ahy17g2116 17 100883423 100888404 ECH
Ahy17g2116 17 100883423 100888404 Ahy8g1001 8 23661492 23666479 hybridization