Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2103 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGAAAACCCCATCAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTAGAGACTATGGCTCTCTTTGGTAAGAAGAAGGCAGCACCACCTCCTCCTTCAAAGAAAGCTGTTGTTGCTATCACTCCTGCCAATGATGAACTCGCTAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCAATATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCCCAGCAAGAAGCCAGAGGACTTTGCCAAGTATGTCTTAACACTTTTTTTCAAACTTGATATATATCCTTTTGGTCACATTAGTTTATGA 399 0.4612 MASIGVSEMLENPIKLSGAARSAPSASSPATLETMALFGKKKAAPPPPSKKAVVAITPANDELAKWYGPDRRIFLPEGLLDRSNIPPYLTGEVPGDYGYDPFGPSKKPEDFAKYVLTLFFKLDIYPFGHISL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2103 132 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 115 - -
Ahy17g2103 132 Gene3D Chlorophyll a/b binding protein domain 73 116 - -
Ahy17g2103 132 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 115 IPR001344 GO:0009765|GO:0016020
Ahy17g2103 132 SUPERFAMILY Chlorophyll a-b binding protein 65 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2103 Ahy-Chr17 98908804 98909732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2103 1 114 Chloroplast and Mitochondria Gene Families AT4G10340 59.130 1.02e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2103 K08916 - ahf:112736459 197.208