Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2101 ATGGAAGATCGCTACTCTGCTGCTGATAACCTACGCGGACAACAAAAACTGCCATTTTTTGGAATTTTTGATGGGCACGGTGGTGCAAAGGCTGCCAAATTTGTGGCAAATAACTTAGAAAAGAATGTGTTAGATGAAGTGATTCTTACCGAAGAAGATAGCATTAAGGAGGCTGTGAAGCACGGTTATGTCAAGACTGATTCTGCTTTCTTGAAAAGTGATCTGATTATTTGTTTTTGA 240 0.3958 MEDRYSAADNLRGQQKLPFFGIFDGHGGAKAAKFVANNLEKNVLDEVILTEEDSIKEAVKHGYVKTDSAFLKSDLIICF* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2101 79 ProSitePatterns PPM-type phosphatase domain signature. 19 27 IPR000222 GO:0043169
Ahy17g2101 79 Pfam Protein phosphatase 2C 1 72 IPR001932 -
Ahy17g2101 79 PANTHER PROTEIN PHOSPHATASE 2C 1 74 IPR015655 GO:0004722|GO:0006470
Ahy17g2101 79 SUPERFAMILY PP2C-like 1 72 IPR036457 -
Ahy17g2101 79 Gene3D - 1 78 IPR036457 -
Ahy17g2101 79 ProSiteProfiles PPM-type phosphatase domain profile. 1 79 IPR001932 -
Ahy17g2101 79 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2101 Ahy-Chr17 98075122 98076098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2101 1 74 PP2C-type Phosphatase Gene Family AT2G30020 56.000 6.41e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2101 K17506 - aip:107607425 147.902