Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2061 ATGCTTGAGCACAATGTTGGTGGGTTTCGATTTGACCAGAGAGAGGTAGTTCATAGTTGCAAGATTGATCCTTGTGTTCAGAGAGTTTTATCAGCAAGACGAGCTTTGAGAGCGTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTCGCGGAAGGCTAGCGAGGAAGCAAGCTGCTGTTACTCTAAGGTTTTGTGATATGCCAAAGGATTGGATGGATCTACCGAGGTATAGCGAAGAGTATATCAATGGTGTTATTAGTTTTTTAGACTTTGCATACTCTGAGGGAGAACCGGACGGACGACAAATTCAATGTCCTTGTAAGAGGTGTTGTAACATTAATTGGTATAGAAGAGATGTGGTATTCGACCATTTAGTAGCCGACGGATTTGTTAAGGGATATAGAACATGGATTAATCATGGCGAATGGGCAATCCCGATGGCGGTTGACGATGACACGGATGATGAAGAAGGTGCACGTGATGACATCGAAGGACTGCTTAATGATGCATTTGGAGATGTATCTCATGCTGAGGGTGTTACTGTAGGTCAAAATGAAGAGGCTAAAAAGTTTTACAATTTAATAGATGGGGCAAGTCAAGAGTTATATCCGGGTTGCAAGAAATTTTCTACAGTATCTTTTACCATCCGTCTGTACTTGTTAAAGTGTTTACACGGTTGGAGCAATGCCTCCTTCACTTCACTTCTTGAGCTATTGAAAGAGGCCATGCCTGACATTAACATACCTTCATCTTTCCATAAGACAAAGTCTATGATAAGAGATTTAGGTCTAGATTATAAAAAAATTGATGCTTGTCCTAATGATTGCCTCCTGTATAGAAAAGAACTAAAGGATGAAAAACACTGTAGTGTGTGTGGAACTTCTCGATATAGTAAAAATTCCAGTGATAATAGCGAGAACCAACCTGACAAGAAAGGTCATCTGATTCCTGCAAAGACTCTGAGATACTTTCCTATAATTCCAAGACTTCAGAGATTATTTATGTGCTCAAAGACGGCAGCTAGTCTGAGGTGGCATGATGAGGAGCACGTAAAAGATGGGACGTTAAAGCATCCTGCTGATGGCTTGGCATGGAAGAACCTTGATGAAATGGATGAAGAATTTACAAAAGAATCTCGCAACATTAGACTAGGCTTGTTAAGTGATGGGTTCAACCCATTTCGTAGCATGAACATTTCTTGGAGCACGTGGCCCGTGATGCTGATGGTATACAACTTGCCTCCGTGGATGTGCATGAAACCCGAATATTGTATGCTTTCTTTGCTTATTCCTGGGCCACAATCACCTGGTAAAGACATTGATGTGTATCTACAACCATTGATTGAAGACTTGAAGTTGTTGTGGGAAAAAGGGATCGAAACCTATGATGCGTCAAAGAATGAGACCTTTCACATGCGGGCAGCTCTTTTGTGGACAATCAACGATTTTCCTGCTTATGCTATGTTGTCTGGGTAG 1476 0.4167 MLEHNVGGFRFDQREVVHSCKIDPCVQRVLSARRALRALRAVVRLQAIFRGRLARKQAAVTLRFCDMPKDWMDLPRYSEEYINGVISFLDFAYSEGEPDGRQIQCPCKRCCNINWYRRDVVFDHLVADGFVKGYRTWINHGEWAIPMAVDDDTDDEEGARDDIEGLLNDAFGDVSHAEGVTVGQNEEAKKFYNLIDGASQELYPGCKKFSTVSFTIRLYLLKCLHGWSNASFTSLLELLKEAMPDINIPSSFHKTKSMIRDLGLDYKKIDACPNDCLLYRKELKDEKHCSVCGTSRYSKNSSDNSENQPDKKGHLIPAKTLRYFPIIPRLQRLFMCSKTAASLRWHDEEHVKDGTLKHPADGLAWKNLDEMDEEFTKESRNIRLGLLSDGFNPFRSMNISWSTWPVMLMVYNLPPWMCMKPEYCMLSLLIPGPQSPGKDIDVYLQPLIEDLKLLWEKGIETYDASKNETFHMRAALLWTINDFPAYAMLSG* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2061 491 PANTHER TRANSPOSASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED 67 491 - -
Ahy17g2061 491 Pfam Transposase family tnp2 353 491 IPR004242 -
Ahy17g2061 491 PANTHER UNCHARACTERIZED 67 491 - -
Ahy17g2061 491 Pfam Transposase-associated domain 69 142 IPR029480 -
Ahy17g2061 491 ProSiteProfiles IQ motif profile. 40 66 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2061 Ahy-Chr17 89388436 89392236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2061 28 63 IQD Protein Family AT1G17480 75.000 1.76e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2061 - - ahf:112763498 998.038