Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2056 ATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCCTTCGGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGAGAGTATAAGCAGGAACTGTCCCACTATGGTCAAAAGATCAACATCATCCTTAGCAAACTCAGGAAGCAAATCACTCTCTGCAATCTACAGATAGTGGAGGCAGAATATATTCGCAAGCTCAGAAAACTTTTTGAGGTTGCCTATCTTCTTCGAGAACTCAAACCTGGGGAGGCTATTTTGGATTGGCCTACGAGAAAAAAAGTGCCTCTAGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATTCATCGGGATGTGAAGGAAGCTAATGTATTACTGGATGTGAAGGCAGCTAATGTCACTTCTGTAGCTATATGTCACTAG 540 0.4185 MKQEAEQFRQWKASREKELLQLKRFAWRELQIATDNFSERNVLGQGGLRKVYKGVLPDGTKIAVKREYKQELSHYGQKINIILSKLRKQITLCNLQIVEAEYIRKLRKLFEVAYLLRELKPGEAILDWPTRKKVPLGTARGLEYLHEQCNPKIIHRDVKEANVLLDVKAANVTSVAICH* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2056 179 SUPERFAMILY Protein kinase-like (PK-like) 20 167 IPR011009 -
Ahy17g2056 179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Ahy17g2056 179 Gene3D Phosphorylase Kinase; domain 1 8 108 - -
Ahy17g2056 179 Gene3D Transferase(Phosphotransferase) domain 1 111 177 - -
Ahy17g2056 179 ProSiteProfiles Protein kinase domain profile. 37 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2056 179 Pfam Protein kinase domain 38 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2056 179 PANTHER LRR RECEPTOR-LIKE KINASE 15 169 - -
Ahy17g2056 179 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 15 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2056 Ahy-Chr17 87822529 87824415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2056 21 166 Receptor kinase-like Gene Family AT5G10290 55.844 6.65e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy17g2056 Pkinase 1.30E-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2056 - - ahf:112766065 358.607