Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1968 ATGGATGCTGAAGACGAGGAAGCTCAACACCTACAACACTCTTATCCACTCCCATACCTCTCTACCACTTCACCACAATGCCACAGCACTGGAGTGGAGCCGGTTGATGCGGCCACCACCGCCGATAATAGAGAAACTCTTGTTGGAGAAGCGGAACAGGCGGCGGTTGCAGCCAATTCGGGCGAAGCGGTTGAAGAGGCGGTGGAGGAGACAGAGATTGGGAATTTGGGAAACGCAGGAGAAGGAGAAATGCAAGTGGTGGAAGATAAGGTTGTTGGCCCTGAGGTTACAAAGGGTGATGATGTGGAGAATGGACAGGGCCAACAAGAAGAGGATGAGATTATGGTGGAGGCAACCGGCGTGGCGAAGATGGAAAAGGAGGAAGCTCCGTTGGTAGCTGAGCACGAAATCAGGGATGGTGAGGATAACGTGGTGGAGCAGACGGAGGTACCAAATGAAGCTGCTTCCGTGGTAGAAAGAGAACAAGGGCAAGAAAAAGAAGATGCAGAAGAAGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGAAGGAGGCGGGTGGGGAGCAAGAAGCTGATGCTGCTAGCGGTATGGCAAATGAAGCTGCTTTATTGGAAGAAGACGAGCAAGTACTAGGACAGCAGCACGAGAATGCAGGCGCCGATGTTGTTGTTGGTGGTGTAGCTAATGAAGCTACTTTCATCAAAGTGAACGAAGGAGGACAACAACAACAACATCAAGAGGAACAAGAGGATGCTGATGTTGGTGGTGGCTTGTCAAATGAAACTGCTTTCATGGAAGAGCAAGAAGCAGCAGAGAAACAAGGAGAAGATGAGGAAGAAGAACAAGCTGCTGCCAGTGATGATATAGGAAATGAAGCTGCTTTGACAGTAGATCAGGAAGAAGAACAAGCCGATGCTGGTGGTGATATGACAAATGAAGCTGCTTTCACGGATGAACATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGATGGCGGTGGCAGTGTTGGGCGCATGGGAGAAGAGACAGAGCCCACTGAAGAGACAGAAGAAACGGAGGAGCAGAGTAGAAGTGTGAGTGGTGGGAAGAGGAAGCGCGGAAGTGGGAAAAATTCAAAGTCCACAGGGAGAGCCCCATCAAGGAAAAAGATGGAAGAGGATGTTTGTTTCATTTGCTTCGACGGGGGTGAGCTTGTTCTTTGTGACCGCAGGGGGTGCCCAAAGGCTTACCATCCTTCTTGCGTTAATCGTGATGAGGCCTTCTTCCGATCCAAGGGTAAATGGAATTGTGGATGGCATATTTGCAGCAACTGTGAGAAGAATGCTTACTACATGTGTTATACATGTACGTTCTCTTTGTGCAAGGGATGCATCAAAGATGCTGTTATCTTATGTGTTAGGGGAAACAAGGGCTTTTGCGAGACATGCATGAGAACTGTAATGTTGATTGAACAGAACAATCATGAAAACATGAACCATGATATGGTATTTAAGGATTGCTTTGCTGAAAACTTTGAGGGACAAGTGGATTTTGATGACAGAAGCAGCTGGGAGTATCTCTTTAAGGACTATTACTTAGATCTAAAAGAAAAGCTATCTCTGACATTCGATGAACTCACACAAGCTAAAAATCCTTGGAAGGGATCTGATAGGCTTCCTTCTAAAGAGGAATCAGCAGATGAACTTTTTGATGCCAATAATGATAGAGGATCTGATTCAGATAGCTCATATGAGAATGTAGATTTGAGTCGTTCCAAAAGAAGAAAGGGCAAGAAGCGGACAAAGTCCCGTTCCAGGGAAGGGACTTCATATGCTTCTGTGGATGGAGCATCTGCAGATGAAAGCTCTGAGTGGGCTTCAAAAGAACTTTTGGAGTTTGTCATGCACATGAGAAATGGGGACAGATCCATTTTGTCACAGTTTGATGTGCAGGCTCTTCTGTTAGAGTATATTAAAAGAAATAAACTTAGAGATCCTCGTAGAAAAAGTCAAATCATTTGTGATACAAGGCTTCAAAATTTGTTTGGTAAACCAAGAGTGGGACATTTTGAAATGTTAAAGCTTCTTGAATCCCATTTCCTTCTAAAAGAAGATTCTCAAACTGATGATATGCAGGGAAGTGTTCTTGATACTGAAATTAGTCATTTGGAAGGTGATGGCAACTCTGATTCATATGTGAAAGCTGGCAAAGATAAGAGACGTAAAACTCGCAAAAAAGGTGATGAAAGAGGACTTCAAACCAATGTGGATGATTATGCTGCTATTGATAATCATAATGTTAATTTAATATATCTCCGACGTAATTTGGTGGAAGAGCTACTTGAAGATACAGAAAAGTTTCATGATAGAGTTGTTGGCGCTTTTGTGAGAATAAGGATTTCGGGTAGTGGCCAGAAGCAAGACTTGTACAGGCTGGTTCAGGTTGTAGGGACTTGCAAAGCATCAGAACCATATAAAGTTGGTAAAAGGATGACAGATTTCTTGCTAGAAATCTTAAATTTAAACAAGACAGAGATTGTATCCATTGATATTATCTCAAATCAGGAGTTCACAGAGGATGAATGCAAGCGACTCCGCCAAAGCATAAAATGCGGGCTCATAAATCGTCTGACACTGGGTGACATTCAGGAAAAAGCATTGGCACTTCAGGCAGTTAGAGTGAATGATTGGTTAGAAACAGAGATAGTGCGGTTAAGTCATCTCCGTGACAGAGCCAGTGAGAAGGGACGCAGAAAAGAGCTCAGAGAGTGTGTTGAGAAGTTGCAACTTCTGAAGACTCCCGAAGAACGACAACGCAGATTGGAGGAAATTCCAGAAATTCACGTGGATCCTAAAATGGATCCAAGTCATGAGTCTGAAGAAGATGAAGATGAAATGGATGAAAAACGACAAGGTGAAAACTACATGAGACCTAGAGGACCTGCTGCATTTGGAAGGAGGGGGAGAGAGATTATTTCTCCTAGGAGTGGTCCTATTTCGAGTGATTCCTGGAGTGCGACACGGAATTATTCTAGTGTGAATCGCGAACTTAGCAGAAATCTGTCTAACAAGGGGTTTTCAAGCAAAGGCGATGATGTTTCTATTGCTAATGAAGTACTAAATGATGCTCAATTACCCCAGGGAAGGGATTGGGGTTCACAATCTAGTGGCCTGGAGAGGCAGAAGCTATCTTCAAGCTTTGAAAGTGGTACTAAAAGTAACCAGCTGTTATCAACACCTGATTGTTTTTCTGCTGCTTTATCAGAAACTTCTGCAGTGTTGTCTTCTGTGGGAGCAGGTCCGCCAGCTATGAAAATAAATGAAAGTGAAAAAATGTGGCATTATCAGGATCCGTCTGGAAAAGTTCAGGGACCATTTTCTATGGTGCAGCTACGCAAATGGAGTAACACAGGGTACTTTCCTGCTGATTTGAGGATTTGGAAAGCCAGTGACAAGCAAGATCAGTCGATGCTCTTAACCGATGCCTTAGCAGGAAAATTTCCTACTGAACCATCAATGCTGGATAAAACTCCTGCTAAGGCTCAATCTGTGATTGATCCACATTACTCATCTTCATACTCTGGCAAGTCTCATTTGGCGGTACAAGCTATGGAAGGTCAAGCTGGAGGAAGACCATCATTTGATCATAATAGTGGATCACATAATCCTCTTTGTTCTCCTGGACAAAATGCTGGAGGAAGTTGGAGATCTAAAGATACCATGAATTCTTTAGCAAGTCGACCTTCATTGGCAGTTGAAGTTCCCAAGAATCTGGCAAATGGTTGGGGTTCTGATGCTGGACTCAGAAATGAAGCAACAAATCTTCCTTCACCTACACCCCAGACTGCTTCAGGTGGGACTAAGATGCAGGCTTTTGAAAATAAATGGTCTCCAACTCCAACCCCTGTCCTATTGGCTGGCTCTCTCTTAGGAAATTCACTCCCTGTTGGGCCTGAAAGTCGTTCAAGTTCACAACCTGGAATGATATCAGCTTCTAAATCAGATAATAATCAAGTACATGTTCATGCAGCGTTACCTGCGATTGCTTCGGGTGTTGACATTCAGACAGCAGGTGTACACTTGCAAAGTCAGAGTGTCAGTAACCATACCTCCCGTTCCGAAGGCCATCAAGGATGGGGCTCTGGTACGGTTCCAAAGCCTGAAGTACAGACGTGGGGAGGTGCTCAACCTCAAAGGATAGAACCAAATAATCCAGTTACTATGCCTGCACAGCCAGCTTCCCATGGTCACTGGGTTGATACTACATCCGTCCAGAACTCTGCCTCATATAGTAATGGAAATCCTAATGGGGCCTTCTCTACACCGAGCTTTCCAGGCATGACTACACCTACACCTACACCTACACCTACACCTGAACCATGGAGACCGCCAAGTTCGAATAGTCAGTCAAACATAGCAGCAGCAGCACCATCCAATGTACCTTATGCTGGTTGGGGTATGCCAGGAAATCAGAATATTAACTGGAGTGGACCTTTACCTGCAAATGTGAACGTAAACTGGATGCCTGGACAGGGGCCAGGACCCAGTAATGCAACTCCAGTATGGGGTGCTCCTAGCCAGGGACCACCTGCGGCAAATGCTGTTGGCTGGGTTGCACCTGGTCAAGGACGTTCGCATGTAAATGCAAATGCAGGTTTGGTTGCACCTGGTCAAGGGCCAACGGTGGGAAGTACTAATCCTGGTTGGGGTTCTTCATCTGGAAATCCAGGCACATGGGGTGGCGAGCAAAGTCGCAATGGGGATAGATTCCACAGCCAGGGCGATCGTGGAACACATGGTGGAGATTCTGGTTATGGAGGTAAATCCTGGAACAGACAATCATCATTTAATGGCAGCGGAAGAGGAGGTTCTTCCAGGCCTCCTGTTGGGGGACAAAGAGGAGTATGTAAGTTCCACGAGAGTGGACATTGCAAGAAGGGGGCCTCCTGTGATTTTATGCACACTTAA 4950 0.4529 MDAEDEEAQHLQHSYPLPYLSTTSPQCHSTGVEPVDAATTADNRETLVGEAEQAAVAANSGEAVEEAVEETEIGNLGNAGEGEMQVVEDKVVGPEVTKGDDVENGQGQQEEDEIMVEATGVAKMEKEEAPLVAEHEIRDGEDNVVEQTEVPNEAASVVEREQGQEKEDAEEEQEEEEEEEEVEKEAGGEQEADAASGMANEAALLEEDEQVLGQQHENAGADVVVGGVANEATFIKVNEGGQQQQHQEEQEDADVGGGLSNETAFMEEQEAAEKQGEDEEEEQAAASDDIGNEAALTVDQEEEQADAGGDMTNEAAFTDEHEEEEEEEEEEDGGGSVGRMGEETEPTEETEETEEQSRSVSGGKRKRGSGKNSKSTGRAPSRKKMEEDVCFICFDGGELVLCDRRGCPKAYHPSCVNRDEAFFRSKGKWNCGWHICSNCEKNAYYMCYTCTFSLCKGCIKDAVILCVRGNKGFCETCMRTVMLIEQNNHENMNHDMVFKDCFAENFEGQVDFDDRSSWEYLFKDYYLDLKEKLSLTFDELTQAKNPWKGSDRLPSKEESADELFDANNDRGSDSDSSYENVDLSRSKRRKGKKRTKSRSREGTSYASVDGASADESSEWASKELLEFVMHMRNGDRSILSQFDVQALLLEYIKRNKLRDPRRKSQIICDTRLQNLFGKPRVGHFEMLKLLESHFLLKEDSQTDDMQGSVLDTEISHLEGDGNSDSYVKAGKDKRRKTRKKGDERGLQTNVDDYAAIDNHNVNLIYLRRNLVEELLEDTEKFHDRVVGAFVRIRISGSGQKQDLYRLVQVVGTCKASEPYKVGKRMTDFLLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGLINRLTLGDIQEKALALQAVRVNDWLETEIVRLSHLRDRASEKGRRKELRECVEKLQLLKTPEERQRRLEEIPEIHVDPKMDPSHESEEDEDEMDEKRQGENYMRPRGPAAFGRRGREIISPRSGPISSDSWSATRNYSSVNRELSRNLSNKGFSSKGDDVSIANEVLNDAQLPQGRDWGSQSSGLERQKLSSSFESGTKSNQLLSTPDCFSAALSETSAVLSSVGAGPPAMKINESEKMWHYQDPSGKVQGPFSMVQLRKWSNTGYFPADLRIWKASDKQDQSMLLTDALAGKFPTEPSMLDKTPAKAQSVIDPHYSSSYSGKSHLAVQAMEGQAGGRPSFDHNSGSHNPLCSPGQNAGGSWRSKDTMNSLASRPSLAVEVPKNLANGWGSDAGLRNEATNLPSPTPQTASGGTKMQAFENKWSPTPTPVLLAGSLLGNSLPVGPESRSSSQPGMISASKSDNNQVHVHAALPAIASGVDIQTAGVHLQSQSVSNHTSRSEGHQGWGSGTVPKPEVQTWGGAQPQRIEPNNPVTMPAQPASHGHWVDTTSVQNSASYSNGNPNGAFSTPSFPGMTTPTPTPTPTPEPWRPPSSNSQSNIAAAAPSNVPYAGWGMPGNQNINWSGPLPANVNVNWMPGQGPGPSNATPVWGAPSQGPPAANAVGWVAPGQGRSHVNANAGLVAPGQGPTVGSTNPGWGSSSGNPGTWGGEQSRNGDRFHSQGDRGTHGGDSGYGGKSWNRQSSFNGSGRGGSSRPPVGGQRGVCKFHESGHCKKGASCDFMHT* 1650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1547 1629 - -
Ahy17g1968 1649 PANTHER UNCHARACTERIZED 220 1649 - -
Ahy17g1968 1649 SMART gyf_5 1105 1160 IPR003169 GO:0005515
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1257 1280 - -
Ahy17g1968 1649 SUPERFAMILY FYVE/PHD zinc finger 386 439 IPR011011 -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1384 1466 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1163 1184 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 15 30 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1309 1327 - -
Ahy17g1968 1649 ProSiteProfiles SWIB/MDM2 domain profile. 613 696 IPR003121 -
Ahy17g1968 1649 SUPERFAMILY Plus3-like 756 885 IPR036128 GO:0003677
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 548 609 - -
Ahy17g1968 1649 CDD Bbox1 435 461 - -
Ahy17g1968 1649 Gene3D SWIB/MDM2 domain 608 704 IPR036885 -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1390 1440 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1308 1327 - -
Ahy17g1968 1649 ProSiteProfiles Zinc finger C3H1-type profile. 1624 1649 IPR000571 GO:0046872
Ahy17g1968 1649 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 220 1649 - -
Ahy17g1968 1649 SUPERFAMILY SWIB/MDM2 domain 618 695 IPR036885 -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 272 287 - -
Ahy17g1968 1649 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 383 478 IPR013083 -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1038 1069 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1601 1616 - -
Ahy17g1968 1649 SMART rtf1 755 865 IPR004343 GO:0003677
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 930 950 - -
Ahy17g1968 1649 SUPERFAMILY GYF domain 1095 1157 IPR035445 -
Ahy17g1968 1649 Pfam GYF domain 1107 1148 IPR003169 GO:0005515
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1553 1581 - -
Ahy17g1968 1649 ProSitePatterns Zinc finger PHD-type signature. 390 450 IPR019786 -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1041 1069 - -
Ahy17g1968 1649 ProSiteProfiles GYF domain profile. 1104 1158 IPR003169 GO:0005515
Ahy17g1968 1649 CDD PHD5_NSD 389 434 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1 33 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 930 1000 - -
Ahy17g1968 1649 Pfam Plus-3 domain 760 863 IPR004343 GO:0003677
Ahy17g1968 1649 SMART PHD_3 389 435 IPR001965 -
Ahy17g1968 1649 CDD SWIB-MDM2_like 619 694 - -
Ahy17g1968 1649 ProSiteProfiles Zinc finger PHD-type profile. 387 453 IPR019787 -
Ahy17g1968 1649 Coils Coil 155 192 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1264 1280 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 550 569 - -
Ahy17g1968 1649 ProSiteProfiles Plus3 domain profile. 755 888 IPR004343 GO:0003677
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 1441 1457 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 236 380 - -
Ahy17g1968 1649 Gene3D - 1105 1164 IPR035445 -
Ahy17g1968 1649 Gene3D - 757 885 IPR036128 GO:0003677
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 122 218 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 317 333 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 165 187 - -
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 122 145 - -
Ahy17g1968 1649 CDD GYF 1104 1159 IPR003169 GO:0005515
Ahy17g1968 1649 MobiDBLite consensus disorder prediction 713 744 - -
Ahy17g1968 1649 SMART swib_2 621 699 IPR019835 -
Ahy17g1968 1649 Pfam SWIB/MDM2 domain 621 694 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1968 Ahy-Chr17 70190896 70201339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1968 387 474 PHD Transcription Factor Family AT5G36670 34.000 1.58e-06 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Ahy17g1968 Plus-3 6.80E-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1968 - - aip:107608758 2982.59