Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1958 ATGATCTCTTCCATCACTAACTCTATGATTTCTCCGGTTCCAGTTGACTGCATTGACTGTGCTACTAATGCATCAGTGGTTAGCGCTCTGAACGAAGGAATTTTAGCTGCAACAGAAATGGCAGGTCTTCAGAAAAAGCCTTGGGTTATGATCAATGTCAATGATGATAAAGATCTTCATATTCGCAAAGCCGAATTTGATCCAGAAGACTGTCCAGCAAATTGTTCTCGCCCTTGCAAAATTGTGTGCCCTGCTAATGCAATATCATTCCTAGGGAAATCAGCATCTGGAACTTCATTTAATACGGAATTACCCAAAGTGTTAATGGATGGAGTCATAACAGAACGCTGCTATGGTTGTGGCCGTTGCCTTCCGGTTTGCCCCTATGACAAAATAATGGGTGCTAATTTTCCAGAAAGTGCAGCCGGAGAGCATCGAGTTCAAGAACATCGAGAAAATGAAGAGCAAGGCATGCGTAATATTCTGAATGACTATATTCTTATCTACAGAAGAATGGGGGTAGAGGCAGAGAAACTGCATATTATTGATAAGGATTGCATTGAAAAAGGAATTGTAGAACTTATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTAATAAGTACCATTCTAGTTCATTTGCAAAGGATACCTTATACACACAAGGCACAAGGGATGCAGGTTTGATTTGA 702 0.4074 MISSITNSMISPVPVDCIDCATNASVVSALNEGILAATEMAGLQKKPWVMINVNDDKDLHIRKAEFDPEDCPANCSRPCKIVCPANAISFLGKSASGTSFNTELPKVLMDGVITERCYGCGRCLPVCPYDKIMGANFPESAAGEHRVQEHRENEEQGMRNILNDYILIYRRMGVEAEKLHIIDKDCIEKGIVELICKHNIKKLVMGAASNKYHSSSFAKDTLYTQGTRDAGLI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1958 233 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 IPR017900 -
Ahy17g1958 233 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER 15 144 - -
Ahy17g1958 233 SUPERFAMILY 4Fe-4S ferredoxins 58 139 - -
Ahy17g1958 233 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 15 144 - -
Ahy17g1958 233 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 105 137 IPR017896 -
Ahy17g1958 233 Gene3D - 26 149 - -
Ahy17g1958 233 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 62 93 IPR017896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1958 Ahy-Chr17 67797117 67803877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1958 132 214 U-box Gene Family AT2G45910 45.783 1.11e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1958 - - aip:110264240 479.944