Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1954 ATGTCCATAAACGAGGATGATGTGAAAAATGATTTTGATAATGATTTGGGTGATGATTTCGATTATCAATCGAATGCAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGTAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCGTGCCAATTTTATAACACTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGCTCGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACAATCTGACACCACCCCAATTTGCGCATCTGGTTCTGGCCAATCGTCGTCTCACTGTCATTGATAAAATCCAAGTAGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGCGTTCCAGAAGGGTGGATATCGTCATGCTGGATTTACACGCAAAGATTTGTACAACTACATTGATCGTTATCGTCGGTCAAAAGTTAAAAATGGGGATGCCAATGCAGCAATAAACTATTTGATTGATATTGTTGCCTTTGACTCAACCTACAAGAAGAATAAATACAATAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTTGGATTCGACCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTGCTAAAACAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTATGTGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTTCTGCCCGATTTTAAAGGTCTTATATACGACAACAACGACCACAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTAG 1095 0.4091 MSINEDDVKNDFDNDLGDDFDYQSNAEDDAEDDDVDSLDSTSKSEEVCGVKRIVDLMVEDIWNLEFRTEDEACQFYNTYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGSRNMRYLDLDDRSREARWKVSCFVESHNHNLTPPQFAHLVLANRRLTVIDKIQVENLHNFGVKTCHIMGYIAFQKGGYRHAGFTRKDLYNYIDRYRRSKVKNGDANAAINYLIDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGFDLLSDETTETYKWLLETFVEAMGGKSAKTVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLPDFKGLIYDNNDHRDFDRRWAAILDKHNLVGST* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1954 364 MobiDBLite consensus disorder prediction 1 42 - -
Ahy17g1954 364 PANTHER OS02G0262500 PROTEIN 123 223 - -
Ahy17g1954 364 Pfam MULE transposase domain 226 320 IPR018289 -
Ahy17g1954 364 Pfam FAR1 DNA-binding domain 74 117 IPR004330 -
Ahy17g1954 364 PANTHER OS02G0262500 PROTEIN 225 360 - -
Ahy17g1954 364 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 123 223 IPR031052 GO:0006355
Ahy17g1954 364 MobiDBLite consensus disorder prediction 11 39 - -
Ahy17g1954 364 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 225 360 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1954 Ahy-Chr17 66851212 66852486 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1954 MULE 2.40E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1954 - - aip:107607270 730.324