Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1916 ATGGCTTCCGCAGAAATTGAGTACCGTTGCTTCGTTGGTGGGCTTGCCTGGGCCACCGACAACGAAGCCCTCGAGAAAGCCTTCTCTTCCTATGGCGAGATCGTCGAATCGAAGGTTATCAATGATCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTTGTAACCTTCGCCACAGAGCAGGCCATGAGGGATGCCATCGAGGGGATGAATGGCCAGAACCTTGATGGACGTAACATCACTGTGAACGAGGCGCAGTCCCGTGGTCGGGGTGGTGGCGGCGGTGGTGGTTACGGTAGTGGTGGCGGCGGTGGTTATGGTGGTGGTGGTTACAACCGTGGAGGAGGAGGAGGAGGTGGTGGATATGGAGGCCGCCGTGAAGGCGGAGGTGGTTACAACCGCGGCGGAGGTGGTGGAGGCTACGGTGGTAACGGTGGTAATGGTGGAGGTGGCTATGGAGGAGGTGGTTACGGTGGTGGGCGGGACCGTGGGTACGGAGACGGTGGATCCCGTTACTCAAAGGGTGGTGGTGCTTCTGATGGAAATTGGAGGAATTAG 555 0.5838 MASAEIEYRCFVGGLAWATDNEALEKAFSSYGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGGGYGGGGYNRGGGGGGGGYGGRREGGGGYNRGGGGGGYGGNGGNGGGGYGGGGYGGGRDRGYGDGGSRYSKGGGASDGNWRN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1916 184 SMART rrm1_1 9 82 IPR000504 GO:0003723
Ahy17g1916 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Ahy17g1916 184 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Ahy17g1916 184 Gene3D - 2 105 IPR012677 -
Ahy17g1916 184 PANTHER GEO13361P1-RELATED 1 139 - -
Ahy17g1916 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Ahy17g1916 184 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 139 - -
Ahy17g1916 184 MobiDBLite consensus disorder prediction 150 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1916 Ahy-Chr17 62224092 62225341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1916 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 1.73e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1916 - K13195 gmx:100777821 165.622