Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1863 ATGTTGGGAATGAATAATCGTGTTGATTTGGTGGAGAAAATCACTCCCTGGAGGGAATCATGGAAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCACAAAAATCCTGCTTTGGATCCTTCTCAAAATCTGTTGCATATGGTCTTAATGGATGAGAAGTTACACAAGATCCAAGCTACGATTAGAGATCAGCTTATATCAAAGTTTGCTGTGTCTCTAAATGAAGGTGATCTGTATTTGATGACCCATTTTACAGTTTTGCCAAACACTGGTTTGAACAGAGTGACCAAACATCGGTTCAGACTTTTGTTCCAATACAAGACCTCTGTTGTTTCTGTGGTCTCTCCAAGGATACCTCATTCCGGGTTGTGTTTTACATCAATAGATGAAATTGATCAAATGACAAAGGACCATAATTTCCTCATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGGAAGCTCATCAAAGCAGTTGTGCTAGAAGTTTTTACTCATGGGAAAAAGGTCCAATGCAATGTGTTTGGAAATGCTTGTGATCTCTTGGAATATGAAAACTTACAAAAATATCCAAGATCTCCGATGATTGTCCTTGAGTCTTTTAAAATCAAACCAATTGAAGGTGGAGTAATTCTACAGAATGTGATCAATGTCTCTAGGTTATTCATTAATCCAGACATTCCTGAGTCTGTTGAGTTCCTAAGCAGATTTAGTGTAGCCAGTTATGGATTCTCAAGACTTGTGACCAATGACCTTGGATACTTAATTTCTAAAGTTGATGGTGATTATTTCAATCCCAAAGAGATCAGTAATATTCAAGATCTTGATGTAGATAACGGGGATGCTCATTACTTTGTAATTGGGACAATTAAGGAAGTTATGGATGAACCAGATTGGTGGTACTACTCATGTGTATGTGGTCATGCTGTTGTTGACCATGAGGATCTCTACCTTTGTGATGCTTGTGGTTCATGTGTTGAACATGTTATGCTCAAGTATAGGATTCGGGTAAAGATTCACCATGCTGGGTGTGATGTTTTGTTTGTTCTGCTTGATAATGCGGCAACAAAACTATTTGGAAAAACCTGTTCTGAAGCATTTCTCAGGATAGACGAAGAATTCCCTGTTGATCCTAGTGTGCTTGCAGTCTGTCGGTCATATTCTCCACAAATGTTTGGTGATGTTGTTGGAGAGGATAAAGTTTTCAAGGTTAAAATCCTTTCTACAGTTGATCCAGATTACTCCGAGTCCTTTAAAATTGTAAATGTCTTTAGTGATAATTCCGAACCAGCTACAACTGATAAAATCTCTTGGTTCTTTCTTTTTGTTATTCTTGTTACATGA 1368 0.3765 MLGMNNRVDLVEKITPWRESWKVHVKVVKLWYHKNPALDPSQNLLHMVLMDEKLHKIQATIRDQLISKFAVSLNEGDLYLMTHFTVLPNTGLNRVTKHRFRLLFQYKTSVVSVVSPRIPHSGLCFTSIDEIDQMTKDHNFLIDFVGIITGVRKERDVASYGKLIKAVVLEVFTHGKKVQCNVFGNACDLLEYENLQKYPRSPMIVLESFKIKPIEGGVILQNVINVSRLFINPDIPESVEFLSRFSVASYGFSRLVTNDLGYLISKVDGDYFNPKEISNIQDLDVDNGDAHYFVIGTIKEVMDEPDWWYYSCVCGHAVVDHEDLYLCDACGSCVEHVMLKYRIRVKIHHAGCDVLFVLLDNAATKLFGKTCSEAFLRIDEEFPVDPSVLAVCRSYSPQMFGDVVGEDKVFKVKILSTVDPDYSESFKIVNVFSDNSEPATTDKISWFFLFVILVT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1863 455 Pfam Domain of unknown function DUF223 47 139 IPR003871 -
Ahy17g1863 455 Gene3D - 266 436 IPR012340 -
Ahy17g1863 455 Gene3D - 10 114 IPR012340 -
Ahy17g1863 455 Gene3D - 117 251 IPR012340 -
Ahy17g1863 455 SUPERFAMILY Nucleic acid-binding proteins 125 247 IPR012340 -
Ahy17g1863 455 SUPERFAMILY Nucleic acid-binding proteins 272 432 IPR012340 -
Ahy17g1863 455 SUPERFAMILY Nucleic acid-binding proteins 10 113 IPR012340 -
Ahy17g1863 455 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1863 Ahy-Chr17 57770208 57773560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1863 2 371 Core DNA Replication Machinery Family AT5G08020 20.102 8.21e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1863 - - ahf:112695694 849.351