Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1859 ATGTTTGATGAGATGATATGGAACTCGAAAGGGAAGCAAGTTGTTGTGTTTCTTGATTACGATGGAACTCTTTCTCCAATTGTTGCAGATCCAGAGAAAGCATTCATGACTAAAAAGATGAGAGCAATACTAAAGGACATAGCAAGACTATTTCCCACTGCCATAGTAACCGGAAGGTGTATTGACAAGGTATACGATTTTGTAAGATTGGGAGAAGTGTACTATGCTGGAAGTCACGGTATGGACATCAAAGGACCAACAAAAAGCCGCAATCATCAGAAAGGTAACAATAATGAAGCATTAGTGCTCTTCCAACCTGCGAGTCAATTCTTGCCCATGATCAACGAGGTGTACAAGATCTTGGTAGAAAAAATGAAGGCTATCCCAGGGGCTAAAGTAGAAAACAACAAGTTTTGTCTGTCCGTGCACTTTCGATGTGTTGAAGAAAAGTGCTGGTCAGCCTTGGCGGAACAAGTTAATTCAGTGCTCAAGGAGTACCCAAAACTTAAGTTAACACATGGGAGAAAAGTTATTGAGATTCGTCCAACTATAAAATGGGACAAAGGCAAGGCTATTGAATTCTTGTTAGAGTCACTAGGCTATGCAAATTCTACCAGCGTATTTCCCATCTATATTGGTGATGATACAACTGATGAGGATGCTTTTAAGGTTCTACGTAGTAAGGGCCAAGGAATTGGGATTCTTGTTTCTCAAATTCAAAAAGAAACTAACGCTATCTACACTTTGCATGATCCTTTAGAGGTTGGACAATTTTTAAGGCGTTTGGCAGATTGGAAAAAAAACAAGTTCTAG 813 0.3961 MFDEMIWNSKGKQVVVFLDYDGTLSPIVADPEKAFMTKKMRAILKDIARLFPTAIVTGRCIDKVYDFVRLGEVYYAGSHGMDIKGPTKSRNHQKGNNNEALVLFQPASQFLPMINEVYKILVEKMKAIPGAKVENNKFCLSVHFRCVEEKCWSALAEQVNSVLKEYPKLKLTHGRKVIEIRPTIKWDKGKAIEFLLESLGYANSTSVFPIYIGDDTTDEDAFKVLRSKGQGIGILVSQIQKETNAIYTLHDPLEVGQFLRRLADWKKNKF* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1859 270 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 267 - -
Ahy17g1859 270 TIGRFAM T6PP: trehalose-phosphatase 11 263 IPR003337 GO:0003824|GO:0005992
Ahy17g1859 270 Gene3D - 16 249 IPR023214 -
Ahy17g1859 270 SUPERFAMILY HAD-like 15 266 IPR036412 -
Ahy17g1859 270 CDD HAD_TPP 15 256 - -
Ahy17g1859 270 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 267 IPR044651 GO:0004805|GO:0005992
Ahy17g1859 270 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 16 226 IPR006379 -
Ahy17g1859 270 Pfam Trehalose-phosphatase 17 251 IPR003337 GO:0003824|GO:0005992
Ahy17g1859 270 Gene3D - 96 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1859 Ahy-Chr17 57259955 57263389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1859 10 264 Trehalose Biosynthesis Gene Families AT1G70290 25.830 3.17e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1859 K01087 - gmx:100788641 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1859 17 57259955 57263389 Ahy17g1859 17 57259955 57263389 ECH
Ahy17g1859 17 57259955 57263389 Ahy8g0644 8 12717526 12719813 hybridization
Ahy17g2939 17 129341223 129343458 Ahy17g1859 17 57259955 57263389 PCT
Ahy7g1636 7 56871779 56875755 Ahy17g1859 17 57259955 57263389 PCT
Ahy17g1859 17 57259955 57263389 Ahy17g2939 17 129341223 129343458 PCT
Ahy17g1859 17 57259955 57263389 Ahy7g1636 7 56871779 56875755 PCT