Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1839 ATGGAGCGCTACGAGATTATCAAAGATATTGGTACTGGGAACTTTGCTGTCGCCAAGTTGTTGAGAGACAAATTTACTAATGAGTTTTTTGCTGTTAAGTTCATTGAAAGAGGCTACAAGATTGATGAGCATGTCCAGAGGGAGATCATGAATCACAGGTCCCTAAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTTTTGACTCCAACACATCTAGCTATAGTAATGGAGTATGCTGCTGGAGGAGAACTCTTCGAGAGGATATGCAATTTCGGTAAATTTTGCGAGGATGAGGCGAGATTTTTCTTTCAGCAATTGATATCAGGAGTTAGTTATTGTCATTCGATGCAAATCTGTCATAGAGATCTGAAACTCGAAAACACACTTCTAGACGGAAGCACTGCACCGCGAGTCAAAATTTGTGACTTTGGTTATTCAAAGTCATCCGTATTGCATTCACAACCGAAGTCTACAGTAGGAACTCCAGCTTACATCGCACCTGAGGTCCTGACAAGGAAAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATATGTGATGTTATTTGGAACTTATCCTTTTGAAGATCCTGCGGATCCTAGAAATTTCAAGAAAACTATTGGGAGGATAGTCGGTGTCCAGTATACAATCCCTGATTGTGAATTAGTTTCCTTGGAATGTAGAGATCTTCTATCAAAAATCTTTGTGGCGAATCCTGAACAGAGAATAACAATATCGGAAATAAAAAACCATCCATGGTTTTTAATGAACTTGCCATTAGAGCTAATGGAAGGTGGAAGCTGTCTAAGCAGCGATGTGAATGTTCCATCGCAGAGTGTCGAGGAAGTACTTTCCATTCTACAAGAGGCAAGAAAGCCTCCTAATGTTCCCATGGTTGGTGACAGCCATGTCACTGAAGGCAGCATGGACCTCGACGATCTATTGGATGCAGACGCAGATGCAGATCTTGATGATTTAGAAACAAGCGGTGAATTTGTGTGCCCTCCTCTTTGA 1032 0.4128 MERYEIIKDIGTGNFAVAKLLRDKFTNEFFAVKFIERGYKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNFGKFCEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLFGTYPFEDPADPRNFKKTIGRIVGVQYTIPDCELVSLECRDLLSKIFVANPEQRITISEIKNHPWFLMNLPLELMEGGSCLSSDVNVPSQSVEEVLSILQEARKPPNVPMVGDSHVTEGSMDLDDLLDADADADLDDLETSGEFVCPPL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1839 343 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1839 343 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy17g1839 343 PANTHER SERINE/THREONINE KINASE 2 336 - -
Ahy17g1839 343 SUPERFAMILY Protein kinase-like (PK-like) 1 283 IPR011009 -
Ahy17g1839 343 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Ahy17g1839 343 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Ahy17g1839 343 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 336 - -
Ahy17g1839 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Ahy17g1839 343 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1839 343 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1839 Ahy-Chr17 51835876 51838815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1839 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 41.516 4.21e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ahy17g1839 Pkinase 1.10E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1839 K14498 - gmx:100798091 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1839 17 51835876 51838815 Ahy17g1839 17 51835876 51838815 ECH
Ahy17g1839 17 51835876 51838815 Ahy7g1667 7 59439931 59443030 hybridization