Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1821 ATGGGAAGAGGCAGAGGAGTTGCGGCTCTGAAACCCACGGCGGCGGTTACGGCGGCGGAGGTAAACGGATCAGAGTCAATGCCAGTATTAAAGGAAGTTAGATACCGCGGCGCGAGGAAGAGACCGTGGGGAAGATTCGCCGCCGAAATCAGAGACCCGTTGAAGAAAGCAAGGGTTTGGCTCGGAACCTTCGATTCCGCCGAGGACGCCGCAAGCGCTTACGACGCCGCCGCAAGAACACTCCTGGGACCAAAAGCCAAGACCAATTTTTCTCGCCTCTCAGGATCCAGCCCTCAATGTAGAACTGCAGCTTCGCCAGCACCACTTGCTGCGATGGGAGATTCAACCCCTTCGCTACTGCTCTGCCGCCCTGGATGGCAACTTGCTCCTCGGCCAGAGCCATTTCCTCCATGTGCAATTTTTTTGAATATGTCGCTGAATTGCTCTGTTCTTCATCTGAAATCTGGAATATTGGTTGAAAATGCAAAAGGGGATTAA 498 0.5361 MGRGRGVAALKPTAAVTAAEVNGSESMPVLKEVRYRGARKRPWGRFAAEIRDPLKKARVWLGTFDSAEDAASAYDAAARTLLGPKAKTNFSRLSGSSPQCRTAASPAPLAAMGDSTPSLLLCRPGWQLAPRPEPFPPCAIFLNMSLNCSVLHLKSGILVENAKGD* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1821 165 SUPERFAMILY DNA-binding domain 34 91 IPR016177 GO:0003677
Ahy17g1821 165 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Ahy17g1821 165 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Ahy17g1821 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 5 101 - -
Ahy17g1821 165 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 101 - -
Ahy17g1821 165 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Ahy17g1821 165 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Ahy17g1821 165 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Ahy17g1821 165 CDD AP2 34 90 IPR001471 GO:0003700|GO:0006355
Ahy17g1821 165 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1821 Ahy-Chr17 49202819 49203406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1821 1 90 AP2-EREBP Transcription Factor Family AT1G50640 67.778 6.69e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy17g1821 AP2 8.90E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1821 K09286 - pvy:116145234 119.012