Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1803 TATAATGAAATTGATGAACAAGATAACGAGCGAGCAATGGGTGGATTGCAAGATAGAGTCAGTTTGTTGAAAAGAATCTCAAGTGATATACACGAGGAGGTGGATAGTCATAACCGGATGCTGGACCGCATGGGGAATGACATGGATTCTTCAAGAGGAGTTCTTTCAGGAACTATGGACAAATTCAAAATGGTCTTTGAGAAAAAATCCAGCCGAAGAACGTTTTCACTTATAGCATCCTTTGTTGTGCTTTTTCTTATAACATACTTTTTTATGTTGTAA 282 0.3759 YNEIDEQDNERAMGGLQDRVSLLKRISSDIHEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFEKKSSRRTFSLIASFVVLFLITYFFML* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1803 93 CDD SNARE_Bet1 6 63 IPR039899 -
Ahy17g1803 93 PANTHER GOLGI SNARE BET1-RELATED 2 91 IPR039897 GO:0015031|GO:0030173
Ahy17g1803 93 SMART tSNARE_6 1 65 IPR000727 -
Ahy17g1803 93 SUPERFAMILY SNARE fusion complex 3 65 - -
Ahy17g1803 93 PANTHER - 2 91 - -
Ahy17g1803 93 Gene3D - 11 74 - -
Ahy17g1803 93 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 3 65 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1803 Ahy-Chr17 47295126 47295824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1803 4 92 SNARE and Associated Proteins AT1G28490 26.966 6.28e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1803 K08504 - gmx:100500028 152.14