Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1801 ATGATAATCGTGGATCAGGTTAACCTCAAACTAGAGAAACCCAATACCCCAACCCTTTCACGCAACCTCTTTCCTAAGAAACCATCGCCGAACCTCTCTCGTACAATTGGCCAAAATTTTCAGTTACCGGGACGCCGCCGTGCCCAGTCCGCTAGTGACCGTTTCTCCCCCCCGCCCCAATTGGATGCACCAACAGCCTCGTGGAAGATAGATGCGACGTGCGTGCATGGTGGTGTCGCGAAACCGTTGTGTCGTGAACTATATCAAACCCTTCCTCGAGCACCGATTTCTGGTGTATGTGTCTGCGTTGAGGCGACATTGTACGGCAGTGTGTATGATGTGAGGGAGAATTCTAATTCCACCGACGTTAATGTTCTGTGTTTGAGTGAAGATGACACACCACTTGTAGAACAGGAGAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGGTAAGCAATAATGAGGTCCCGGATCACACTGGAATTCCAATGGAGGAAATCCCGTACGTAGGATTGAGATTTGATTCGTTACAGCAGGCACAAGAGTTCTATTCTAATTATGCGAAGAAAGTTGGGTTTGTGACGATGATTAGGAATACAAACTTTGACAAGACCAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTGCAGTTGTGAAGGTTATTGGGAGTCTCGAGTGAAGGCGGCAATGCGGGTAAAGAGAATAACAATAGCTGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGCTGGTGACCAAATTAGAATTGAAGTACACCCATGCGTGTTCTGCCGAGCAAGCTGTGCATTATAGTGAGTACAGGAAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGGCATACAGCCTAACAAGACGTATCTCGCACTGGCGAACGAGGTTGGTGGGTCATCAAAGTTGGGTTACTCAGAAAAGGATGTTAGGAACTATATAACGAGGAATTTGCGCTGTGCTGATGTAAACGAAGATGTGAAGGAAATGATTAGATATTTCATGCGAATGAGAGATATAAACCCGAATTTCTTCTATACAGTTGATGTGGACGAAACTAACAAGTTTAAGAGTGCGATATGGGTAGATGCAAGATGCAGAGCATCGTATGAATATTTTGGAGATGTGGTATCATTTGATACAACGTACAGAAGGAACAAGCATGGACTTCCGTTTGCATCTTTCGTTGGTGTCAACCATCACGACACGTCCACACTACTTGCCATCATCACGGACCAGTGCAAATCCATATTTGGCGTAATTAAGAATGTCTTCCCAAATACTAGACACCGATAG 1356 0.4469 MIIVDQVNLKLEKPNTPTLSRNLFPKKPSPNLSRTIGQNFQLPGRRRAQSASDRFSPPPQLDAPTASWKIDATCVHGGVAKPLCRELYQTLPRAPISGVCVCVEATLYGSVYDVRENSNSTDVNVLCLSEDDTPLVEQEKESEDAIQKKDDATVSNNEVPDHTGIPMEEIPYVGLRFDSLQQAQEFYSNYAKKVGFVTMIRNTNFDKTRKELKVPINQSIHCSCEGYWESRVKAAMRVKRITIAGCKARMYVMLDRHNDNWLVTKLELKYTHACSAEQAVHYSEYRKLTMHAKCVIQNNDEAGIQPNKTYLALANEVGGSSKLGYSEKDVRNYITRNLRCADVNEDVKEMIRYFMRMRDINPNFFYTVDVDETNKFKSAIWVDARCRASYEYFGDVVSFDTTYRRNKHGLPFASFVGVNHHDTSTLLAIITDQCKSIFGVIKNVFPNTRHR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1801 451 Pfam FAR1 DNA-binding domain 185 274 IPR004330 -
Ahy17g1801 451 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 137 438 - -
Ahy17g1801 451 MobiDBLite consensus disorder prediction 25 46 - -
Ahy17g1801 451 MobiDBLite consensus disorder prediction 25 63 - -
Ahy17g1801 451 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 137 438 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1801 Ahy-Chr17 47070452 47072718 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1801 FAR1 2.60E-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1801 - - aip:107607166 926.006