Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1794 ATGGTTTCTAAAGAAGAGAATTGGCTGAAGAGGTATTTACACTATTGTCGGACTGAATGCAACTTTCGTCTATCAGAATCTGATGCAACATTACTGCAAAAAAGTTATGTGAAAATCAGGCAGGATATGAGGCAGCAAACCAATGAAACTGGAGAAGTTACTACACCAATTATAGTAAGATCTCATGTTGCTACTGAGGAGGATGTGAAAGAAGCAATAAGGCTTTTCACCATGTCTACAATGGATGCTGCTCGGTCTGGAATACACCAACAAATCAGTCTCACACCAGAAATGGAAAATGAAATAAAGAGAAAGTGTTCAATGATATCCTCAGAAAAGTTCAAGAAGAAGGATAATTTCAAGAATCCATTGTATATAGAGAATCTGATGGAGGAATATGTCACCAGCTTCTGGGTTGGTTAA 423 0.3759 MVSKEENWLKRYLHYCRTECNFRLSESDATLLQKSYVKIRQDMRQQTNETGEVTTPIIVRSHVATEEDVKEAIRLFTMSTMDAARSGIHQQISLTPEMENEIKRKCSMISSEKFKKKDNFKNPLYIENLMEEYVTSFWVG* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1794 140 PANTHER DNA REPLICATION LICENSING FACTOR MCM5 4 105 - -
Ahy17g1794 140 Pfam MCM AAA-lid domain 8 77 IPR041562 -
Ahy17g1794 140 Gene3D - 2 98 IPR027417 -
Ahy17g1794 140 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 4 105 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1794 Ahy-Chr17 46376503 46380592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1794 3 109 Core DNA Replication Machinery Family AT2G07690 50.400 3.33e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1794 K02209 - aip:107607159 207.608