Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1774 ATGAGAGCTGCGATCATGGTGTATGTTGATTTTTGGGAGATGGAGTCGTCGGATAGCGATTTTTTTGGAACAGACTCCGATGAGGAGTTCCCAAGAGGAGACGATCTAGATTTTTTAGATGACGATACGGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCAATTCTACAATACTTATGCAATGATGCACGGTTTTGTTGTGAGGTTGGATGAAGTCAGACACGATAGCAATGGTTGCATAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTTGGATATAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGTGA 606 0.4373 MRAAIMVYVDFWEMESSDSDFFGTDSDEEFPRGDDLDFLDDDTEADEDRPQDKRIAELSREDIMQLQFTDEEAVYQFYNTYAMMHGFVVRLDEVRHDSNGCIIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCRARIRARLDRKIHKWKVVSFYEEHSHGLVDPLDVSMMPEYRTFSVLDIAQAKNLHDIGIRTCHIL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1774 201 MobiDBLite consensus disorder prediction 20 46 - -
Ahy17g1774 201 Pfam FAR1 DNA-binding domain 76 165 IPR004330 -
Ahy17g1774 201 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 168 - -
Ahy17g1774 201 MobiDBLite consensus disorder prediction 17 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1774 Ahy-Chr17 45201519 45204030 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1774 FAR1 4.10E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1774 - K17604 aip:107620373 319.701