Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1771 ATGGCCTCCAATTCACACAGGGCGGCTCCTTTCTACGGCGTCGCTGCCCCTTTCCGGTCAAGAGATGGGCTTAGCACAAGGGCAGTATCGGGGACCGACGAGATCCAATTGCGAATTGATCCCTTCGACTTGGAGGACGAGATCACCGGTCTTCATACCCAAGTTCGAAGGTTGAAACATGTTGCAAACGAGATAGGCACAGAAGTAAAGTATCAAAAGGATTTTTTGGAACAAGTGGTTGGTCGCCATATAGCTCGTCTGCCGGTGAATAACTTGGAGCTTTCCATCGAGATGAATTATACTTCGGCAACAGGAGAACAAGGGGGTGGGTACATGCAAAAGGCACTCTGA 351 0.4986 MASNSHRAAPFYGVAAPFRSRDGLSTRAVSGTDEIQLRIDPFDLEDEITGLHTQVRRLKHVANEIGTEVKYQKDFLEQVVGRHIARLPVNNLELSIEMNYTSATGEQGGGYMQKAL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1771 116 CDD SNARE_Qc 43 79 - -
Ahy17g1771 116 Gene3D - 45 83 - -
Ahy17g1771 116 PANTHER GOLGI SNARE BET1-RELATED 9 79 IPR039897 GO:0015031|GO:0030173
Ahy17g1771 116 SUPERFAMILY SNARE fusion complex 43 79 - -
Ahy17g1771 116 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1771 Ahy-Chr17 45158810 45162788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1771 K08505 - gmx:100306642 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1771 17 45158810 45162788 Ahy17g1771 17 45158810 45162788 ECH
Ahy17g1771 17 45158810 45162788 Ahy8g0703 8 13803343 13805477 hybridization
Ahy17g3004 17 130583291 130585398 Ahy17g1771 17 45158810 45162788 PCT
Ahy7g1710 7 62095818 62098607 Ahy17g1771 17 45158810 45162788 PCT
Ahy17g1771 17 45158810 45162788 Ahy17g3004 17 130583291 130585398 PCT
Ahy17g1771 17 45158810 45162788 Ahy7g1710 7 62095818 62098607 PCT