Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1764 ATGGAATTTGACGAGCAAGAAGAGCAAGAGGAGGAACTGGGAATACCTGAGGCACCGCAGCCGCAAGCCACGCAAGCGTGTTACGACTCACTCGGAAACTCAGCGAAACTCACTGGGGATGGAACCGCCGCGTCAGGCTTTGGACGAAAAGGAGCAGCAGCGTCGTCGGTGAGGTACCGTGAATGTCAGAAGAACCACGCCGTCAGCTTCGGCGGCCACGCCGTAGACGGTTGCTGCGAGTTCATGGCCGCCGGAGAGGACGGCTCGCTGGAGGCCGTCATCTGCGCTGCCTGCAACTGCCACCGCAACTTTCACCGCAAAGAGATCGACGGCGACATAAGAGGTGGAAGCGGCGCCGGGACCTTACACCACCACCGTCCTCAACCTCCTCCGCCGCATCTCCACCAATTCTCCCCTTACTACCACCACCGCGGTCCGCCGTACCCGGCAGGGTACCTTCACCACCTTGCAACACCTCCGATGGCTCAGCACCGTCCTCTAGCACTTCCTGCAGCGGTTTCCGGCGGTGGACTAAGCAGAGATGAGGAGGACATGTCGAACCCTAGCAGCAGCGGTGGCGGCGGCGGAGGCGGAGGTGGCGGTTGCGGAAGCGGTTCTTCAAAGAAAAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGCTTGCTTTCGCTGAACAAGTTGGATGGCGGATCCAGAAGCAAGATGAAGCCATGGTTGAACAGTTCTGTGCCGAAGCTTGCGTTAAGAGGAGCGTTCTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGAATATGTGAGAGAAATTGTGTGTGCCTGTGTGGGAGAGAGAAGAGAGACGACGAAGAAGAAAGACCGTCCCCCCGGGGGGTGCTGCGCCCCCGTGACCATACCGCTCCATCATTGCCTAAAAATGAAAGATAATAATGCTACAGAATAA 951 0.5689 MEFDEQEEQEEELGIPEAPQPQATQACYDSLGNSAKLTGDGTAASGFGRKGAAASSVRYRECQKNHAVSFGGHAVDGCCEFMAAGEDGSLEAVICAACNCHRNFHRKEIDGDIRGGSGAGTLHHHRPQPPPPHLHQFSPYYHHRGPPYPAGYLHHLATPPMAQHRPLALPAAVSGGGLSRDEEDMSNPSSSGGGGGGGGGGCGSGSSKKRFRTKFTQEQKDKMLAFAEQVGWRIQKQDEAMVEQFCAEACVKRSVLKVWMHNNKNTLEYVREIVCACVGERRETTKKKDRPPGGCCAPVTIPLHHCLKMKDNNATE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1764 316 MobiDBLite consensus disorder prediction 1 24 - -
Ahy17g1764 316 Gene3D - 197 268 - -
Ahy17g1764 316 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 50 268 - -
Ahy17g1764 316 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 50 268 - -
Ahy17g1764 316 SUPERFAMILY Homeodomain-like 195 266 IPR009057 -
Ahy17g1764 316 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 208 265 IPR006455 -
Ahy17g1764 316 MobiDBLite consensus disorder prediction 171 210 - -
Ahy17g1764 316 Pfam ZF-HD protein dimerisation region 57 109 IPR006456 -
Ahy17g1764 316 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Ahy17g1764 316 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 59 108 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1764 Ahy-Chr17 44101840 44106264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1764 1 268 ZF-HD Transcription Factor Family AT4G24660 47.955 1.10e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy17g1764 ZF-HD_dimer 1.00E-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1764 - - ahf:112765272 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1764 17 44101840 44106264 Ahy17g1764 17 44101840 44106264 ECH