Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1752 ATGGAAAATATTGTGATTTGGTTTCAGATACATGAAGAGGCTAGGAAGTTTGCATATCAAACAGGGGTTAAGGTGGTTGTTGCTTATGGCGGAGCTCCAATAAACCATCAGCTACGAGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTATATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATCTTGCACCAGATGAGGTAGATAGGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGACCCCTCCAGGTGTAAGACAAATTATGCTATTCAGTGCCACATTTCCTAAAGAGATACAGGTTTAG 360 0.4222 MENIVIWFQIHEEARKFAYQTGVKVVVAYGGAPINHQLRDLEKGVDILVATPGRLVYLLERARVSLQMIRYLAPDEVDRMLDMGFEPQIRKIVEQMDMTPPGVRQIMLFSATFPKEIQV* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1752 119 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C 8 118 - -
Ahy17g1752 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 117 IPR027417 -
Ahy17g1752 119 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 119 IPR014001 -
Ahy17g1752 119 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 118 - -
Ahy17g1752 119 Pfam DEAD/DEAH box helicase 8 117 IPR011545 GO:0003676|GO:0005524
Ahy17g1752 119 Gene3D - 6 119 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1752 Ahy-Chr17 43317588 43318472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1752 9 116 Eukaryotic Initiation Factors Gene Family AT3G13920 37.037 1.91e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1752 K11594 - aip:107607056 223.016