Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1749 ATGGCATCGAGTAGTTTGCGGAGTGTTTCAAGCCTTCTATGTGCAGAGGACAACAACAGCGTCTTCGACGAAAATGATTACGGCGGTGGTTCGGTGTTGTCGGCGGACACGTGGCATCATCCTAGGCATCAAAACCGTGAGGAGTTACTCTGGCAAGTGCCACAAGCTGTTAGCGAAGAGTATTTGGTGTTAATGGTGGAGAAAGAGTGTGACCACTTGCCTTGTCATGATTATCTTCATAGGCTCACAAATGGGGATTTGGATTTTGGGGCCAGAAATCATGCCATTCATTGGATTCAAAAGAAGCAAAGGGTTTGGACAGTGCAATTGTTGGCTGTGGCTTGCTTATCTCTTGCAACCAAAATAAATGAGACTGATCCTCCTCTTTGCCTTGATTTGCAGGTTGGTGAATTAAAATTTGTATTTGAAGCAAAAACAATCCAAAGAATGGAGCTTTTGGTACTTAGCACATTGAGATGGAGAATGCAATCAATTACCCCTTTCTCCTTCATTGACTATTTCCTTTACAAGGTCAATGATGATCAAAATCCAACAAGAGATTCAATTATGAGATCCATCCAACTTATACTGAGTACTGTAAAAGGGATTGAATGCTTGGAGTTTAGACCATCAGAGATTGCAGCTGCTGTAGCAATAGTTGTGGTAAGGGAAACAAAAACAGTGCACACTGAGAAAGCAATTTCTCTTCTGAATCACCTAGTGGAAAAGGAGAGAGTGTTGAAATGTGTGAAATTAATCCGAGGGTTGTCATCAAAGGATGGTTTTACTAATAAGGACACAAGAAGTGGTTCTGTTTCTGCCCCTTTGATGCCACAAAGTCCAATTGGGGTGTTGGATGGTGTGTGCTTAAGCTACAAAAGTGAGGACACTAATGCTGCTGCTTCGTATGCAAACATTAATTCATCTTCACATAATACTAGTCCAGATGCTAATAAAAGGAGGAAGCTAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACCTATGCAGCACCAGCATAG 1056 0.392 MASSSLRSVSSLLCAEDNNSVFDENDYGGGSVLSADTWHHPRHQNREELLWQVPQAVSEEYLVLMVEKECDHLPCHDYLHRLTNGDLDFGARNHAIHWIQKKQRVWTVQLLAVACLSLATKINETDPPLCLDLQVGELKFVFEAKTIQRMELLVLSTLRWRMQSITPFSFIDYFLYKVNDDQNPTRDSIMRSIQLILSTVKGIECLEFRPSEIAAAVAIVVVRETKTVHTEKAISLLNHLVEKERVLKCVKLIRGLSSKDGFTNKDTRSGSVSAPLMPQSPIGVLDGVCLSYKSEDTNAAASYANINSSSHNTSPDANKRRKLNNNNNNNNNNNNNNNNNNNNNNTYAAPA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1749 351 CDD CYCLIN 106 155 IPR013763 -
Ahy17g1749 351 Gene3D - 164 251 - -
Ahy17g1749 351 Gene3D - 103 163 - -
Ahy17g1749 351 SMART Cyclin_C_2 165 280 IPR004367 -
Ahy17g1749 351 SUPERFAMILY Cyclin-like 55 162 IPR036915 -
Ahy17g1749 351 Pfam Cyclin, N-terminal domain 107 162 IPR006671 -
Ahy17g1749 351 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 104 323 - -
Ahy17g1749 351 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 41 101 - -
Ahy17g1749 351 Pfam Cyclin, C-terminal domain 165 259 IPR004367 -
Ahy17g1749 351 PANTHER CYCLINS 41 101 IPR039361 -
Ahy17g1749 351 MobiDBLite consensus disorder prediction 305 351 - -
Ahy17g1749 351 SUPERFAMILY Cyclin-like 147 253 IPR036915 -
Ahy17g1749 351 Coils Coil 320 340 - -
Ahy17g1749 351 PANTHER CYCLINS 104 323 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1749 Ahy-Chr17 42974285 42978848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1749 65 296 Core Cell Cycle Gene Families AT2G22490 44.151 2.23e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1749 K18810 - gmx:100803873 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1749 17 42974285 42978848 Ahy17g1749 17 42974285 42978848 ECH
Ahy17g1749 17 42974285 42978848 Ahy8g0717 8 14083697 14086648 hybridization