Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy17g1748 | ATGATGTGGGAATGGGAAGAATTAGACGACGCCGTTCCGCAAAACGACCAGCCTGATACCGATTCCTACCTCAACTTCGATCTCTTCTCTGCTCTCTCTAAGCCCAAGGATTATTATAAGATATTGGAAGTGGATTACGATGCTACGGATGATGCTATTCGTTCTAATTACATTCGTCTAGCTCTGAAATGGCACCCAGACAAGCAGAAAGACCAAGGTGCTGCCACCACGCGGTTCCAGGAGATAAACGAGGCTTATCAGGTTTTGAGTGATCCTGTAAAGAGGAGAGAATATGACAGGAATGGGATGCTTTACGCTTATGATTATGATATCATTGATTATCTTAACCGCTACAAGGGCCTTATATTGACTTGCAACGGTCTTGGAATGAAGCATTCTATATGGTAA | 408 | 0.4338 | MMWEWEELDDAVPQNDQPDTDSYLNFDLFSALSKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQGAATTRFQEINEAYQVLSDPVKRREYDRNGMLYAYDYDIIDYLNRYKGLILTCNGLGMKHSIW* | 136 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy17g1748 | 135 | PRINTS | DnaJ domain signature | 57 | 72 | IPR001623 | - | |
Ahy17g1748 | 135 | PRINTS | DnaJ domain signature | 74 | 94 | IPR001623 | - | |
Ahy17g1748 | 135 | PRINTS | DnaJ domain signature | 39 | 57 | IPR001623 | - | |
Ahy17g1748 | 135 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 2 | 135 | - | - | |
Ahy17g1748 | 135 | ProSitePatterns | Nt-dnaJ domain signature. | 79 | 98 | IPR018253 | - | |
Ahy17g1748 | 135 | Pfam | DnaJ domain | 37 | 99 | IPR001623 | - | |
Ahy17g1748 | 135 | ProSiteProfiles | dnaJ domain profile. | 37 | 102 | IPR001623 | - | |
Ahy17g1748 | 135 | SMART | dnaj_3 | 36 | 94 | IPR001623 | - | |
Ahy17g1748 | 135 | CDD | DnaJ | 37 | 91 | IPR001623 | - | |
Ahy17g1748 | 135 | Gene3D | DnaJ domain | 29 | 111 | IPR036869 | - | |
Ahy17g1748 | 135 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 2 | 135 | - | - | |
Ahy17g1748 | 135 | SUPERFAMILY | Chaperone J-domain | 33 | 122 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy17g1748 | Ahy-Chr17 | 42961719 | 42966606 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy17g1748 | 30 | 106 | C2H2 Transcription Factor Family | AT1G74250 | 41.667 | 2.10e-12 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy17g1748 | - | - | var:108338470 | 240.736 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy17g1748 | 17 | 42961719 | 42966606 | Ahy17g1748 | 17 | 42961719 | 42966606 | ECH | |
Ahy17g1748 | 17 | 42961719 | 42966606 | Ahy7g1722 | 7 | 63223474 | 63228401 | hybridization |