Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1748 ATGATGTGGGAATGGGAAGAATTAGACGACGCCGTTCCGCAAAACGACCAGCCTGATACCGATTCCTACCTCAACTTCGATCTCTTCTCTGCTCTCTCTAAGCCCAAGGATTATTATAAGATATTGGAAGTGGATTACGATGCTACGGATGATGCTATTCGTTCTAATTACATTCGTCTAGCTCTGAAATGGCACCCAGACAAGCAGAAAGACCAAGGTGCTGCCACCACGCGGTTCCAGGAGATAAACGAGGCTTATCAGGTTTTGAGTGATCCTGTAAAGAGGAGAGAATATGACAGGAATGGGATGCTTTACGCTTATGATTATGATATCATTGATTATCTTAACCGCTACAAGGGCCTTATATTGACTTGCAACGGTCTTGGAATGAAGCATTCTATATGGTAA 408 0.4338 MMWEWEELDDAVPQNDQPDTDSYLNFDLFSALSKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQGAATTRFQEINEAYQVLSDPVKRREYDRNGMLYAYDYDIIDYLNRYKGLILTCNGLGMKHSIW* 136
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1748 135 PRINTS DnaJ domain signature 57 72 IPR001623 -
Ahy17g1748 135 PRINTS DnaJ domain signature 74 94 IPR001623 -
Ahy17g1748 135 PRINTS DnaJ domain signature 39 57 IPR001623 -
Ahy17g1748 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 135 - -
Ahy17g1748 135 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Ahy17g1748 135 Pfam DnaJ domain 37 99 IPR001623 -
Ahy17g1748 135 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Ahy17g1748 135 SMART dnaj_3 36 94 IPR001623 -
Ahy17g1748 135 CDD DnaJ 37 91 IPR001623 -
Ahy17g1748 135 Gene3D DnaJ domain 29 111 IPR036869 -
Ahy17g1748 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 135 - -
Ahy17g1748 135 SUPERFAMILY Chaperone J-domain 33 122 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy17g1748 Ahy-Chr17 42961719 42966606 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1748 30 106 C2H2 Transcription Factor Family AT1G74250 41.667 2.10e-12 61.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1748 - - var:108338470 240.736
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1748 17 42961719 42966606 Ahy17g1748 17 42961719 42966606 ECH
Ahy17g1748 17 42961719 42966606 Ahy7g1722 7 63223474 63228401 hybridization