Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1709 ATGGCACAAATATGCATGTATATGGTCAGAAACGATAGTATTACTATATATGCAGTGTCAATCACCATTCATATTGTGTTTGATTTCATGTTTATTGCATTGATTTGGAAGTTTGATTTTGCACCCTTTATGGTGTTGATCATGGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCCCCACAAACTGATAGCTGGAAATTGATGGAGATATTTGCTACTGGTATTGTGCTTGGAAGTTACCTGGCACTAATGACAGTAGTATTTTTCTGGCTTATGAAGGACACTGACTTCTTCTCGTTCACATGTTATCACCTACTAGTGGAAATTGTGACAGTTATGAACACTAACTTTCTGTTGTTGCGGGACAAGTTTGGTGTAAGGTCTCTGAGACACAGCCCTGCAGAAATGATGGCAGCCCTTTACCTACAAGTGGCAACTGCTCTTGCAGTATATGCTAACTGGAGCTTTGCAAGAATCAAGGGAATGGGATGA 516 0.3953 MAQICMYMVRNDSITIYAVSITIHIVFDFMFIALIWKFDFAPFMVLIMAILNDGTIMTISKDRVKPSPQTDSWKLMEIFATGIVLGSYLALMTVVFFWLMKDTDFFSFTCYHLLVEIVTVMNTNFLLLRDKFGVRSLRHSPAEMMAALYLQVATALAVYANWSFARIKGMG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1709 171 Gene3D - 10 160 - -
Ahy17g1709 171 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 161 IPR023298 -
Ahy17g1709 171 PANTHER CALCIUM-TRANSPORTING ATPASE 10 153 - -
Ahy17g1709 171 PANTHER ATPASE 5, PLASMA MEMBRANE-TYPE 10 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1709 Ahy-Chr17 40046120 40049942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1709 10 171 Primary Pumps ATPases AT2G24520 55.556 3.88e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1709 K01535 - ahf:112763181 343.199