Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1659 ATGGAGTTGTATGACCATGATTTCTTGGATGAGTTAATGTCACTAAGAAGAGAAACATGGGAAAGCACAAATAATAATCCATGTGATGAAGAAGGAAACTACCAATTACTCTTCTCAAATAATAATGGGTGGGATAATAGTGGCGGTTTTGATCATCAAAATTATTACTCATCACCTTCTTCTATTTTTGTTCCAAACTCCTCTTATTCTTGTTCTTCTTCTTCTTACCAAGAAGTTCCTCAAAATTGCAACGATTATTATTGTGACACTACCTTCAATGAAATCTATAGTTCCTTGCTTGAAGAATTCTCAGCACCACAGATCAATAATAGTGACACTACTACTCCACCACCAATACTAATGAGTGATCATCAAGAGGATTATAATAATAGTAATAATAATGAGAATCCATTATTGGTGTCTATGTTGGTGGAAGAAGAGCTTCAAAGCTTGGAGATGCAAAGAGAGTGCAAAATGGAGGCAAGTCAATCATCTTCTCCTCCTGTTTTCAACTCGGAAAGGAAGAACAATAATAGAGCAAAGAAGGTTGAGGGCCAACCCTCCAAGAATCTAATGGCTGAGAGGAGAAGAAGGAAGAGATTGAATGATAGGCTCTCCATGCTTAGATCAATTGTCCCTAAGATTAGCAAGATGGACAGAACATCTATACTTGGTGACACCATTGATTACATGAAGGAACTACTAGACAAGATCAATACTTTGAAACAAGAAATCCAAGTGGTGGATGACTCAAATGGCATTTTATCCAATGATATACACCCAAATGATATTTTAGTGAGAAATTCTCCCAAGTTTGATGTGGAGAGGAGGAATAATAATGGAGACACAAGAGTTGAGATCTGTTGTGGTGGGAAGCCAGGGATGTTGCTATCTACAGTCAACACTTTGGAAGCATTGGGTCTTGACATTCAACACTGTGTTATAAGCTGTTTCAATGACTTCACAATGCAAGCTTCTTGCTCAGAGGAGTTGGAGCAGAAGAGAATGGTGAGTTCTGAAGATATAAAGCAAGCACTGTTTAGGACCGCAGGATATGGAGGGAGATGTTTCTGA 1074 0.3818 MELYDHDFLDELMSLRRETWESTNNNPCDEEGNYQLLFSNNNGWDNSGGFDHQNYYSSPSSIFVPNSSYSCSSSSYQEVPQNCNDYYCDTTFNEIYSSLLEEFSAPQINNSDTTTPPPILMSDHQEDYNNSNNNENPLLVSMLVEEELQSLEMQRECKMEASQSSSPPVFNSERKNNNRAKKVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLDKINTLKQEIQVVDDSNGILSNDIHPNDILVRNSPKFDVERRNNNGDTRVEICCGGKPGMLLSTVNTLEALGLDIQHCVISCFNDFTMQASCSEELEQKRMVSSEDIKQALFRTAGYGGRCF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1659 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 248 IPR036638 GO:0046983
Ahy17g1659 357 Pfam Helix-loop-helix DNA-binding domain 191 234 IPR011598 GO:0046983
Ahy17g1659 357 MobiDBLite consensus disorder prediction 159 199 - -
Ahy17g1659 357 MobiDBLite consensus disorder prediction 175 199 - -
Ahy17g1659 357 SMART finulus 191 240 IPR011598 GO:0046983
Ahy17g1659 357 Gene3D - 173 252 IPR036638 GO:0046983
Ahy17g1659 357 CDD ACT_UUR-ACR-like 283 324 - -
Ahy17g1659 357 PANTHER DNA BINDING PROTEIN 3 356 - -
Ahy17g1659 357 Coils Coil 231 251 - -
Ahy17g1659 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 234 IPR011598 GO:0046983
Ahy17g1659 357 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 356 - -
Ahy17g1659 357 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1659 Ahy-Chr17 36740687 36743266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1659 115 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 55.967 3.64e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy17g1659 HLH 7.80E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1659 - - gmx:100814388 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1659 17 36740687 36743266 Ahy17g1659 17 36740687 36743266 ECH
Ahy17g1659 17 36740687 36743266 Ahy8g0774 8 15340099 15343092 hybridization