Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1641 ATGGCCACATCTCAAGACGAATGCGTTTCATGCGAGGGTCATCCTTCATGCACACCACCGGACAAAGATACATTAATGGAGTGCGATATCGTTGAACCCCTAGGCTGTGATATGTCTGCCGTTGCAGTGGTTTCATCAGACCAACCTCAAAACATATCCGGCGATGTCATCGTCGACGTTGAGAAGTCGAACAAGGCCATGCAGCTGTCGGATGTTACCGAGGTTGGAAGTGAAGAGATGGAGCTTGGTGATGAGTTACCAGACCATGGTTGCCTACAAGAAGACAAGATACCAAGAGTTGGAATGCGGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTTACCTATGCAAAGAAAGTTGGATTTGCAACTAAGATAAGGACGACAACATATGACAAGATCACAAAGGCTCCCGTTAACCAAGCTATACACTGTAATCGCTATGGGTACCGCGAGTCTCATGTTAAAGCACCAACGCGGAAGAATATGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTCAAGTTTGATAAAGACATGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACACACTCACATCCCTGTTCAGTGAGAAAGGCAGTGCACTACCATGAGTATAGGCAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGGCTGTGATTCGACCAAATAAGACATTCCTTGCTTTGTCAAATGAGGCTGGAGGCCCCTCTAACTTAGGATTCTCAGAGAAGGATTTAAGAAACTATATAGCAGCAAGGCTCCGAACTAGCAATGTGAATGCGGATGTCAGGGAGATGATGAGCTACTTCATGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGAGGAGTGTAAATTTAAGAGTGCAGTATGGGTGGATGCAAGATGTAGGGCATCGTATGAATACCACAGAGATGTTGTGTCAGTTGATAGCACCTACAGTACAAACAGGCATGGATTACCGTTTGTGTCGTTCGTTAGGGTCAACTACCATGGTAAGTCAACCCTCCTCGGTTGTGCTTTGCTGGGGAATAAGGAAATCACAAGTTATGAGTGGGTTTTCAGCCAATGGGTGAAGTGCATGGGATCTGCTCCACAGCGTATCATAACCGATCAATGTCGGTCCATTTTCTATGTGATCAGGAATACATTACCCGACACACGCCACCGATGGTGCATCTGGCATATTACGAAGAAGTTACCGAGCAAGCTTGGTGGTTACCGCCGGTACAGAGCTTTGTATGATGACCTCAATGACATCGTGTGGGACTCTCGGACTGAGGAGTCATTTGAGGATAACTGA 1344 0.4613 MATSQDECVSCEGHPSCTPPDKDTLMECDIVEPLGCDMSAVAVVSSDQPQNISGDVIVDVEKSNKAMQLSDVTEVGSEEMELGDELPDHGCLQEDKIPRVGMRFAQLQMAHDFYVTYAKKVGFATKIRTTTYDKITKAPVNQAIHCNRYGYRESHVKAPTRKNMISAAGCKARIYVKFDKDMQDWVLFKVDLTHSHPCSVRKAVHYHEYRQLTMHAKCVIEDNDEAVIRPNKTFLALSNEAGGPSNLGFSEKDLRNYIAARLRTSNVNADVREMMSYFMRMKDINPNFFYAVKLDEECKFKSAVWVDARCRASYEYHRDVVSVDSTYSTNRHGLPFVSFVRVNYHGKSTLLGCALLGNKEITSYEWVFSQWVKCMGSAPQRIITDQCRSIFYVIRNTLPDTRHRWCIWHITKKLPSKLGGYRRYRALYDDLNDIVWDSRTEESFEDN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1641 447 Pfam MULE transposase domain 320 413 IPR018289 -
Ahy17g1641 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 446 IPR031052 GO:0006355
Ahy17g1641 447 Pfam FAR1 DNA-binding domain 112 198 IPR004330 -
Ahy17g1641 447 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 62 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1641 Ahy-Chr17 35186866 35193538 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1641 MULE 1.80E-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1641 - - ahf:112733025 755.362