Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1635 ATGAACAATACTACAACCCTTTGCACCAAAATAAATGGTGATAGTGAGAAGAGAAAGATAACAAGAGAGCTTCTTAATGGCCATGAAGCTGCAACTCAGCTGAAGCTTCTTCTTCTTAAGAATCCCAATGGAGGGTCTTCTCTCTCAGCTGAAGAGCTTGTTGCCAATGTCCTCAGATCCTTCAATGAAATCCTTTCCATTCTCTCTTCCCAAAATGCTGGGATTCCGGCGGAAGATGATTCTGATCAGTGTAAGAACAAAAGAACCGCCACAAAGACAGCAAGAGGAAGAGGTTGCTACAAAAGAAGGAGGAGTGCAGACACATGGACCATAGTTTCGCTCACTGCTGATGATAATTACACATGGAGGAAATATGGACAGAAACAAATCTTGAGTTCTATATTTCCAAGGAGCTACTTTAGATGCAGTAGAAAGTATGAGGAAGGTTGCCGGGCAATCAAACAGGTGCAAAAGACACAAGAGAATCCTGTTATGTACGAAACTACCTACACTGGCATGCATACATGCAAATCCACCCCCAATAGTAATAATAATGTTCCACGTTTGCTTCTGAATTCTCAGAATCATCATCATGATTCTAAGGTATCCAATGAAAAGGATTATTACCCTATAATTAGTCCTCTAACTCCAACTGTAACACAAGAACATGCTAAAGAAGATTCACCTAGTGATGTTGGAGATCATAAACTGGATCCTGTTTGGTCGGATTTGAAGGATTTTGAACCATCCATCAAGCCTTCCATTAACTTGGTAAAGAATTTTGGGATGGATTCTGTTCATTTTGGCACTCATGATGATGATGATGATGATGAGTTCCAGCCACCACTTTGA 852 0.4049 MNNTTTLCTKINGDSEKRKITRELLNGHEAATQLKLLLLKNPNGGSSLSAEELVANVLRSFNEILSILSSQNAGIPAEDDSDQCKNKRTATKTARGRGCYKRRRSADTWTIVSLTADDNYTWRKYGQKQILSSIFPRSYFRCSRKYEEGCRAIKQVQKTQENPVMYETTYTGMHTCKSTPNSNNNVPRLLLNSQNHHHDSKVSNEKDYYPIISPLTPTVTQEHAKEDSPSDVGDHKLDPVWSDLKDFEPSIKPSINLVKNFGMDSVHFGTHDDDDDDEFQPPL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1635 283 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 16 257 - -
Ahy17g1635 283 Pfam WRKY DNA -binding domain 117 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1635 283 ProSiteProfiles WRKY domain profile. 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1635 283 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 257 IPR044810 GO:0003700
Ahy17g1635 283 MobiDBLite consensus disorder prediction 216 235 - -
Ahy17g1635 283 Gene3D WRKY domain 102 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1635 283 SUPERFAMILY WRKY DNA-binding domain 113 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1635 283 SMART WRKY_cls 116 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1635 Ahy-Chr17 34852910 34858489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1635 15 244 WRKY Transcription Factor Family AT3G56400 34.661 9.20e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g1635 WRKY 7.60E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1635 - - aip:107608135 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1635 17 34852910 34858489 Ahy20g1866 20 102637357 102640152 ECH
Ahy17g1635 17 34852910 34858489 Ahy17g1635 17 34852910 34858489 ECH
Ahy17g1635 17 34852910 34858489 Ahy7g1798 7 67248920 67253507 hybridization
Ahy17g1634 17 34836056 34841254 Ahy17g1635 17 34852910 34858489 PCT
Ahy7g1799 7 67258827 67263980 Ahy17g1635 17 34852910 34858489 PCT
Ahy17g1635 17 34852910 34858489 Ahy17g1634 17 34836056 34841254 PCT
Ahy17g1635 17 34852910 34858489 Ahy7g1799 7 67258827 67263980 PCT